Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02192 ATGGTGATTCCTGATGAGAAGAATTCTAACTTGATCAACAACCCCACAAATTATCAAGGAGGGTTAGAATGTATGGGTACCAGAAAGGTTGGGCAGAACAGAAGAGCACTGAGCGCAATCAATCAGAATCTGGTGGAAGGTGGTAAACCTTATCCGTGTGTTGTTAACAAAAGGGCCTTGTCAGAAAAACATGATCTATGTGAAAAAAAGCAAGCGGATCCGGTGCATCGACCCATCACCAGGAGGTTTGCTGCACAAATTGCTAACACACAGCACTCTCATGTTGAGGAGACTAAAAAGTCAAACTTGGCAATTTCAAATTCCAATGGATTTGGAGAATTTATATTTATTGATGATGAACACAAGGAGGACCAACCTGTGCCCATGTCTTTAGAGCAAACAGAACCAATGCATAGTGAACCAGATCAGATGGAGGAGGTTGAAATGGAGGATATAGTGGTGGAAGAGCCTGTTTTGGACATTGATACCTGTGATGCAAATAATCCTCTTGCGGTCGTTGACTATATTGAAGATCTGTATTCCTACTATAGAAAAATGGAGAGTACTAGCTGCGTCTCACCAAATTATATGGCACAACAATTTGACATCAATGAAAGGATGAGGGCTATACTGATTGACTGGCTTATTGAGGTGCACGACAAATTTGACCTCATGCATGAGACATTGTTTCTAACAATTAATCTTATAGATAGATTTTTGGCTAAGCAATCAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTCTAGTTGCCATGCTTCTGGCATGCAAGTATGAGGAGGTTTCAGTACCTGTGGTTGGGGATCTGATTCTTATATCAGATAAAGCATACACAAGGAAAGAAGTTCTGGAAATGGAGAAATTGATGGTCAATACATTGCAATTTAACATGTCTGTGCCAACAGTTTATGTTTTCATGAAAAGGTTCCTAAAGGCAGCTCAAGCAGATAGAAAACTTGAGGCACTAGCATTCTTCTTGGTAGAGTTATCTCTAGTAGAATATGAGATGCTGAAGTTCCCTCCATCTCAGCTAGCAGCAGCTGCAGTCTACACAGCTCAATGCACTATCTATGGTTTCAAACAGTGGAGTAAGACATGTGAATGGCACACTAACTACTCAGAAGATCAACTATTAAAGTGCTCTAGTTTAATGGTTGATTTTCACCACAAGGCTGGGACAGGGAAACTGACAGGGGTGCATAGGAACCACAACAACAAAAACAACACCTTGCCGTTCACCTCTTTCTCCTTTAAGCCCATATCCATCAAATGCGCAACCCAATTGGAGGCCCACCCGGCGCCTCAAACCCAATCCCAAGATCGGGTCTTTAACTTCGCCGCCGGTCCGGCCACCCTGCCGGAGAAGGTCCTCCTGAAGGCTCAATCGGAGCTCTACAACTGGCGCGGATCCGGCATGAGCGTGATGGAGATGAGCCACAGAGGCAAAGAATTCCTCTCCATAATCCAAAAAGCTGAATCGGATCTTCGTACCCTCTTGCAGATCCCACCGGAATATTCGGTCTTGTTCCTTCAGGGTGGCGCCACCACCCAATTCGCCGCCGTGCCGTTGAACCTCTGCACCCCTGAAGACACCGTTGATTATGTTGTCACCGGTTCATGGGGTGACAAGGCGTTCAAGGAGGTGCAGAAGTATTGTAAACCAAAGGTGATTTGGTCTGGGAAATCTGAAAAGTACACAAAGATTCCATCTTTTGATGAATTGGAGCAGAACCCAGATGCTAGGTATTTGCATATATGTGCTAATGAGACTATTCATGGTGTTGAGTTTAAGGATTACCCTACCCCCAAAAATGCAACTGGTATTTTGGTTGCTGATATGTCTTCCAATTTTTGTTCCAAGCCTGTGGATGTGTCCAAATTTGGGGTAATCTATGCTGGGGCCCAGAAGAATGTGGGGCCCTCTGGTGTCACCATTGTGATCATAAGAAAGGATCTGATTGGGAATGCTCAGCCTGTGACTCCTGTGATGCTTGATTACAAGATACATGATGAGAACAAATCACTTTACAATACCCCTCCTTGTTATGGTATCTACATGTGTGGGTTGGTGTTTGAGGACCTGTTGGAGCAAGGGGGTTTGAAGGAGGTTGAGAAGAAGAACAAGAAGAAAGGTGAGATTCTCTACAATGCCATTGATGAAAGCAATGGTTTTTATAGATGCCCAGTGGAGAGGTCAGTGAGGTCGTTGATGAATGTGCCATTTACTTTGGAGAAAGCAGAATTGGAGGCAGAGTTCATCAAGGAAGCTGCTAAGGAAAAGATGGTTCAGCTCAAGGGACATAGGTCAGTAGGAGGCATGAGAGCTTCCATATACAATGCTATGCCTTTGGCTGGGGTTGAGAAGTTGGTGGCTTTCATGAAGGATTTCCAAGCCAGGCACGCCTAG 2424 0.4431 MVIPDEKNSNLINNPTNYQGGLECMGTRKVGQNRRALSAINQNLVEGGKPYPCVVNKRALSEKHDLCEKKQADPVHRPITRRFAAQIANTQHSHVEETKKSNLAISNSNGFGEFIFIDDEHKEDQPVPMSLEQTEPMHSEPDQMEEVEMEDIVVEEPVLDIDTCDANNPLAVVDYIEDLYSYYRKMESTSCVSPNYMAQQFDINERMRAILIDWLIEVHDKFDLMHETLFLTINLIDRFLAKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLMVNTLQFNMSVPTVYVFMKRFLKAAQADRKLEALAFFLVELSLVEYEMLKFPPSQLAAAAVYTAQCTIYGFKQWSKTCEWHTNYSEDQLLKCSSLMVDFHHKAGTGKLTGVHRNHNNKNNTLPFTSFSFKPISIKCATQLEAHPAPQTQSQDRVFNFAAGPATLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFLSIIQKAESDLRTLLQIPPEYSVLFLQGGATTQFAAVPLNLCTPEDTVDYVVTGSWGDKAFKEVQKYCKPKVIWSGKSEKYTKIPSFDELEQNPDARYLHICANETIHGVEFKDYPTPKNATGILVADMSSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIIRKDLIGNAQPVTPVMLDYKIHDENKSLYNTPPCYGIYMCGLVFEDLLEQGGLKEVEKKNKKKGEILYNAIDESNGFYRCPVERSVRSLMNVPFTLEKAELEAEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQARHA. 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02192 807 Gene3D - 460 702 IPR015421 GO:0003824
Seca9g02192 807 PANTHER PHOSPHOSERINE AMINOTRANSFERASE 443 807 IPR022278 GO:0004648|GO:0006564
Seca9g02192 807 Gene3D - 192 304 - -
Seca9g02192 807 CDD CYCLIN_AtCycB-like_rpt1 155 301 - -
Seca9g02192 807 NCBIfam phosphoserine transaminase 448 806 IPR022278 GO:0004648|GO:0006564
Seca9g02192 807 CDD CYCLIN_AtCycB-like_rpt2 306 411 - -
Seca9g02192 807 CDD PSAT_like 449 803 IPR022278 GO:0004648|GO:0006564
Seca9g02192 807 FunFam G2/mitotic-specific cyclin-1 282 416 - -
Seca9g02192 807 Pfam Cyclin, N-terminal domain 178 304 IPR006671 -
Seca9g02192 807 SMART Cyclin_C_2 306 419 IPR004367 -
Seca9g02192 807 ProSitePatterns Aminotransferases class-V pyridoxal-phosphate attachment site. 633 652 IPR020578 -
Seca9g02192 807 Coils Coil 749 769 - -
Seca9g02192 807 Gene3D Aspartate Aminotransferase, domain 1 703 807 IPR015422 GO:0003824
Seca9g02192 807 Gene3D - 178 412 - -
Seca9g02192 807 Hamap Phosphoserine aminotransferase [serC]. 446 806 IPR022278 GO:0004648|GO:0006564
Seca9g02192 807 SMART cyclin_7 213 297 IPR013763 -
Seca9g02192 807 SMART cyclin_7 310 392 IPR013763 -
Seca9g02192 807 Pfam Aminotransferase class-V 448 795 IPR000192 -
Seca9g02192 807 ProSitePatterns Cyclins signature. 208 239 IPR006671 -
Seca9g02192 807 FunFam Phosphoserine aminotransferase 703 807 - -
Seca9g02192 807 SUPERFAMILY Cyclin-like 305 411 IPR036915 -
Seca9g02192 807 SUPERFAMILY PLP-dependent transferases 446 804 IPR015424 -
Seca9g02192 807 SUPERFAMILY Cyclin-like 167 303 IPR036915 -
Seca9g02192 807 Pfam Cyclin, C-terminal domain 306 413 IPR004367 -
Seca9g02192 807 FunFam Phosphoserine aminotransferase 460 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02192 Seca-Chr9 34477864 34487724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02192 1 411 Core Cell Cycle Gene Families AT1G20610 60.766 3.92e-169 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02192 K00831 K21777 gmx:100798068 697.967