Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02184 ATGAATTTCTTTACTGCAGGTTCAGGGAGTACTAATAATAATAATGACACTAAGAAGAACGTGGCTATGGCATCCTGTGCTAGTAGTGTTCAACTTTGGGAAGGAACAACCACAAGTGGGAAGCTTCTAGAAATTACTCCAAACTTGAAGGTGTTTACTTTTGCAGATTTGAAAGCAGCCACCAAAGGTTTTAAATCAGATGCATTGCTTGGAGAAGGTGGTTTTGGTAAAGTTTACAAAGGTTGGTTGGATGAGAAGACTCTGAGTCCTGCCAAAGCTGGTTCAGGAATGATGGTAGCCATAAAGAAATTGAAACCTGAAAGTATGCAAGGGGTTCAAGAGTGGCAGTCAGAAATCAACTTTTTAGGAAGCGTTTCTCACCCCAACTTGGTCAAGCTATTGGGTTACTGTAGGGAAGATGACGAATTTCTTCTTGTGTATGAGTTCATGCCAAAGGGAAGCTTGGAGAATCACCTCTTCAGAGGAGATATTAACATTGGATCACTTTCTTGGAACACTCGACTCAAGATAGCTATTGGTGCAGCTCGGGGCTTGGCTTTCTTGCACACATCAGAAAAGCAAGTTATATACAGAGATTTCAAGGCCTCCAATATACTACTTGATGGGAATTTCAATGCAAAAATTTCAGATTTTGGCTTGGCTAAATTTGGGCCTTCTGGGGGAGATTCACATGTGACTACCAGGATCATGGGCACATTTGGCTATGCTGCCCCAGAGTACATTGCAACAGGTGATGACTATATATTTATATATATCTTCACACATAAATGGATGTTTTGTAAAGATATATACTTGAGAACAATACTTAATTATGTTGTTGATGATCAACACTTGAACATGATAAACAGTCTAATTAAGCTAATTCTTTGTAACATTGTGTCCTTATTCAACAGGTCACTTGTATGTGAATAG 933 0.3912 MNFFTAGSGSTNNNNDTKKNVAMASCASSVQLWEGTTTSGKLLEITPNLKVFTFADLKAATKGFKSDALLGEGGFGKVYKGWLDEKTLSPAKAGSGMMVAIKKLKPESMQGVQEWQSEINFLGSVSHPNLVKLLGYCREDDEFLLVYEFMPKGSLENHLFRGDINIGSLSWNTRLKIAIGAARGLAFLHTSEKQVIYRDFKASNILLDGNFNAKISDFGLAKFGPSGGDSHVTTRIMGTFGYAAPEYIATGDDYIFIYIFTHKWMFCKDIYLRTILNYVVDDQHLNMINSLIKLILCNIVSLFNRSLVCE. 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02184 310 PANTHER OS01G0588500 PROTEIN-RELATED 23 252 - -
Seca9g02184 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Seca9g02184 310 Gene3D Transferase(Phosphotransferase) domain 1 150 271 - -
Seca9g02184 310 Gene3D Phosphorylase Kinase; domain 1 48 149 - -
Seca9g02184 310 FunFam Os07g0541700 protein 150 239 - -
Seca9g02184 310 SUPERFAMILY Protein kinase-like (PK-like) 41 269 IPR011009 -
Seca9g02184 310 ProSitePatterns Protein kinases ATP-binding region signature. 70 103 IPR017441 GO:0005524
Seca9g02184 310 Pfam Protein kinase domain 65 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02184 310 ProSiteProfiles Protein kinase domain profile. 64 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02184 310 FunFam Serine/threonine-protein kinase BIK1 34 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02184 Seca-Chr9 34218934 34223324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02184 44 251 Glycoside Hydrolase AT3G07070 52.133 1.12e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca9g02184 Pkinase 2.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02184 - - gmx:100794193 364.77