Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02182 ATGGATTCTACTTTGCTGACCAAACTATTGGTCTTCAACAACACCGTTCAACGAGAGTTGATTAGGAGCTTGCATGTGTACCGCCAATGGGATGAGGAGGAAAGGGAAGTTGAAAGAGAGTTTGTGTTTTCAGAGAGTGGCTCCTATGCGGAAATGCAGGCTACCCCAATTCTTAGTTTGCTGAAAATTCCTTTTTCTGAAGTCTGTGAGGGGTTCCAGAATGGAGTGTGGCTTTGTATCTTTGCGTTTCATGCCGATCACACTCCTCAATTTTCCCCCATTCCACCCCTTTTGTTGGTCACCAGAAACCCAAAACTTCATATGATTCCAAACTTGCTTAATGATCTTCATATGATATACAAGTTGGACTGGAAGGAGGAAAACAAAGATATACCACAAGACTCTACAAGGGAAGAATGGAAAGGAGACAACAATGATTGCCAACAATCTCCAAGAGTCTCACCCGTGTTGGATCTGGATCTCAATTGTCTTCCTTATGAAGAAGACAAGCCTGAGTTACCCGACAATGAGATAGAGGCTGAATGCTTACAAGGTTCAGAATCAATGCTCTCAGGTTTGGGAGGAAAGAAAAAGAGGGCTCCCAGTGACCATGTAGCGAAAATTTCTTTTTCAGATTTGGTCAAGTACTTTGATATGCCAATTGTAGAAGCATCAAGACATCTAAATGTTGGGCTTACTGTTCTCAAGAGAAAATGCAGAGAATTTGGTATTCCCCGGTGGCCTCATAGGAAGATCAAATCACTTGACAGTCTCATTCATGATCTTCAGACATGGCAAAATGTTTTGGATTTTACCATAAAGAACATTTGGGTGAAAGCTTGTTGCAGTTCACTTTGA 858 0.4172 MDSTLLTKLLVFNNTVQRELIRSLHVYRQWDEEEREVEREFVFSESGSYAEMQATPILSLLKIPFSEVCEGFQNGVWLCIFAFHADHTPQFSPIPPLLLVTRNPKLHMIPNLLNDLHMIYKLDWKEENKDIPQDSTREEWKGDNNDCQQSPRVSPVLDLDLNCLPYEEDKPELPDNEIEAECLQGSESMLSGLGGKKKRAPSDHVAKISFSDLVKYFDMPIVEASRHLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHDLQTWQNVLDFTIKNIWVKACCSSL. 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02182 285 PANTHER PROTEIN RKD4 77 261 IPR044607 GO:0003700
Seca9g02182 285 ProSiteProfiles RWP-RK domain profile. 190 275 IPR003035 -
Seca9g02182 285 Pfam RWP-RK domain 208 255 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02182 Seca-Chr9 34209865 34213911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02182 16 263 AtRKD Transcription Factor Family AT4G35590 47.656 6.47e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Seca9g02182 RWP-RK 2.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02182 - - gmx:113001653 379.022