Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02153 CACGTGCAATTGCGTCCATTGCGTTCAGGAGCTCTCAAAGAAGTTGGCACGGAATTAAGCAATGTTCTAGCTGTCCCACCTCTAATTTCCTCTTCATTGTCCCAAAAACTTGAGAAGTTAAGAGAAAGGCAGTGTAGAGTCTTCATTGTCCATTTGTCCCTTCCTTTGGCACTACACATGTTTGAAACTGCAAACAAAATGAATATGAAGGAGGAAGGTAATGTATGGATTACTACTAGTACCATCACAAGCCTTGTTCATTCCTTGAATGGCTCAGGCAATGAGGGAAACCAACCAAACAGGGATCAACTTTTGCTAGATAAGATTTTGCTAAGTAATTTCACTGGCTTAAGTGGAAAAATTCAGTTCAATGACCATAAAATAGCTCCAGCACATACTTTTCAGATCATTGGTGTGATTGGGAAGAGCTACAGGGAAATTGGGTTCTGGTCAGATGGACTTGGTTTCTCAAAAACTTATGGAAAAAATGCTTCTTACAGTTCTTCGGTGAAGGAATTGGGAAAAGTGGTTAATCCAATATGTGCTAAACGACTAAGAATTGGTGTCCCCTCTTATGCAACATTCAAACCATATGTCGATGTTATTCAAGATGACTCTCAAAGTGCTCCCTCCTTCAAGGGAATTGTTATAGATCTTTTCAAAGAAATAGTAAAACAATTACCATACCATTTGGAATATGATTTCTTTGCCTTCAATGGCACACATGATGAATTGGTGAAGCAAATTTATTTGAAGAAATATGATGCAGTTGTTGGTGATGTAACAATAGAGTCCGCGCGTTATGAATATGCTTCATTCACTCAGCCCTATACTGATCCAGGAATGGTGATGATTGTTCCTGTTCAATCAGAAATAGGCAACAGAGCGTGGTTATTCATGAAGCCTTTCACAAAGCTAATGTGGATTCTAATTTTGGTCATCATTGTCTACAATGGCTTTGTTGTATGGATGATTGAAAGAAACCACCGCCCAGAACTTAGAGGTCCTATTCTGCATCAAACGATAATTGTACTGTGGTTGGCTTTCATTTCTCTGTTCTCTCTGAATGGTAATTCTGTTCTGCCTTGA 1089 0.3903 HVQLRPLRSGALKEVGTELSNVLAVPPLISSSLSQKLEKLRERQCRVFIVHLSLPLALHMFETANKMNMKEEGNVWITTSTITSLVHSLNGSGNEGNQPNRDQLLLDKILLSNFTGLSGKIQFNDHKIAPAHTFQIIGVIGKSYREIGFWSDGLGFSKTYGKNASYSSSVKELGKVVNPICAKRLRIGVPSYATFKPYVDVIQDDSQSAPSFKGIVIDLFKEIVKQLPYHLEYDFFAFNGTHDELVKQIYLKKYDAVVGDVTIESARYEYASFTQPYTDPGMVMIVPVQSEIGNRAWLFMKPFTKLMWILILVIIVYNGFVVWMIERNHRPELRGPILHQTIIVLWLAFISLFSLNGNSVLP. 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02153 362 Gene3D - 295 357 - -
Seca9g02153 362 SUPERFAMILY Periplasmic binding protein-like I 13 151 IPR028082 -
Seca9g02153 362 Pfam Bacterial extracellular solute-binding proteins, family 3 210 290 IPR001638 -
Seca9g02153 362 Gene3D - 6 179 - -
Seca9g02153 362 Gene3D - 180 294 - -
Seca9g02153 362 FunFam Glutamate receptor 181 295 - -
Seca9g02153 362 SUPERFAMILY Periplasmic binding protein-like II 182 314 - -
Seca9g02153 362 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 350 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02153 Seca-Chr9 33978465 33979978 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02153 11 352 Ion Channels AT2G24720 30.728 1.17e-45 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02153 - - gmx:100776939 414.461