Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02151 ATGGATGAAACAACCCAAAATATATATGATGGTGAGGACAGATCGAGAAACAAAAGGAGGCACGTGCAATTGCGTCCATTGCGTTCAGGAGCTCTCAAAGAAGTTGGCACGGAATTAAGCAATGTTCTAGCTGTCCCACCTCTAATTTCCTCTTCATTGTCCCAAAAACTTGAGAAGTTAAGAGAAAGGCAGTGTAGAGTCTTTATTGTCCATTTGTCCCTTCCTTTGGCACTACACATGTTTGAAACTGCAAACAAAATGAATATGAAGGAGGAAGGTAATGTATGGATTACTACTAGTACCATCACAAGCCTTGTTCATTCCTTGAATGGCTTAGGCAATGAGGGAAACCAACCAAACAGGGATCAACTTTTGCTAGATAAGATTTTGCTAAGTAATTTCACTGGCTTAAGTGGAAAAATTCAGTTCAATGACCATAAAATAGCTCCAGCACATACTTTTCAGATCATTGATGTGATTGGGAAGAGCTACAGGGAAATTGGGTTCTGGTCAGATGGACTTGGTTTCTCAAAAACTTATGGAAAAAATGCTTCTTACAGTTCTTCGGTGAAGGAATTGGGAGAAGTGGTTAATCCAATATGTGCTAAACGACTAAGAATTGGTGTCCCCTCTTATGCAACATTCAAACCATATGCCGGTGTTATTCAAGATGACTCTCAAAGTGCTCCCTCCTTCAAGGGAATTGTTATAGATCTTTTCAAAGAAATAGTAAAACAATTACCATACCATTTGGAATATGATTTCTTTGCCTTCAATGGCACACATGATGAATTGGTGAAGCAAATTTATTTGAAGAAATATGATGCAGTTGTTGGTGATGTAACAATAGAGTCCGCGCGTTATGAATATGCTTCATTCACCCAGCCCTATACTGATCCAGGAATGGTGATGATTGTTCCTGTTCAATCAGAAACAGGCAACAGAGCGTGGTTATTCATGAAGCCTTTCACAAAGCTAATGTGGATTCTAATTTTGGTCATCATTATCTACAATGGCTTTGTTGTATGGATGATTGAAAGAAACCACCGCCCAGAACTTAGAGGTCCTATTCTGCATCAAACGATAATTGTACTGTGGTTGGCTTTCATTTCTCTGTTCTCTCTGAATGCCGAGGCTCACCAGAACGCAATGAAGACAATGGCAAGTGCTAAAGAGAGATGCGAGATAGCAAAACAAGCAACCAGAGAAGAAGAACTTGAGCGATTGAGGTTGGAAGAGATTTCCAACTTTAGAGCTCAAGCTTAA 1266 0.3965 MDETTQNIYDGEDRSRNKRRHVQLRPLRSGALKEVGTELSNVLAVPPLISSSLSQKLEKLRERQCRVFIVHLSLPLALHMFETANKMNMKEEGNVWITTSTITSLVHSLNGLGNEGNQPNRDQLLLDKILLSNFTGLSGKIQFNDHKIAPAHTFQIIDVIGKSYREIGFWSDGLGFSKTYGKNASYSSSVKELGEVVNPICAKRLRIGVPSYATFKPYAGVIQDDSQSAPSFKGIVIDLFKEIVKQLPYHLEYDFFAFNGTHDELVKQIYLKKYDAVVGDVTIESARYEYASFTQPYTDPGMVMIVPVQSETGNRAWLFMKPFTKLMWILILVIIIYNGFVVWMIERNHRPELRGPILHQTIIVLWLAFISLFSLNAEAHQNAMKTMASAKERCEIAKQATREEELERLRLEEISNFRAQA. 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02151 421 Coils Coil 380 407 - -
Seca9g02151 421 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 28 109 IPR015683 -
Seca9g02151 421 SUPERFAMILY Periplasmic binding protein-like I 32 171 IPR028082 -
Seca9g02151 421 Gene3D - 316 409 - -
Seca9g02151 421 Pfam Bacterial extracellular solute-binding proteins, family 3 229 310 IPR001638 -
Seca9g02151 421 SUPERFAMILY Periplasmic binding protein-like II 202 334 - -
Seca9g02151 421 Gene3D - 203 315 - -
Seca9g02151 421 Gene3D - 15 202 - -
Seca9g02151 421 FunFam Glutamate receptor 201 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02151 Seca-Chr9 33954927 33960465 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02151 31 372 Ion Channels AT2G24720 30.728 2.79e-46 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02151 - - gmx:100776939 414.846