Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02131 ATGGAGTTTGAACCTCTGAGTCTCAGCAACGAGGTCATTGAATTTGATATGATTGGTTTGGGGGATGATGGTGGCATTGACATTGAGCACCCTGTTGAAGAAGATGACGACCTTGTTAATGTTGACAATAGTCCTGCTGCTGCTGCTGCTATTACCAGTCCAGTTGCTACTGTGGGACCTCACATCGCTGGAGGGGAAACAATCCTTGAACCTCATCAAGGTATGGATTTTGAATCAGAAGAGGCTGCTAAGGCCTTTTATAATTCCTATGCTCGCCGTGTTGGCTTTAGCACACGGGTTAGCATGTCTCGCCGCTCCAGGCGTGATGGTGCTATAATTCAGAGGTCTTTTGTGTGTGCCAAGGAAGGTTTTCGTGTGGAGAAGGACAGGAATTCTCTTGATGGAAGAGTCAAGCGGCCTCGTGCTGAAACCCGAGTTGGTTGCAAGGCAATGTTGGTTGTGAAAATTCAAGATTCTGGCAGATGGGTTGTTTCTTCCTTTGTCAAGGAACACAACCATGAATTGGTTCCACCTGATAAGGTGCATTGCCTTAGGTCTCATCGCCATGTTTCAGGTCCTGCTAAGTCATTGATTGATACTTTGCAGGGTGCTGGAATAGGGCCAAGTGGAATTATGTCTGCACTTATCAAAGAATATGGTGGAATCAGCAATATCGGTTTCACTGAGCGTGACTGTAGGAATTATATGAGGAGCAGTAGGCAAAGGACCCTCGGAGGTGACACTCAAATCCTCTTGGATTACTTGAAGAGCAAACAAGCAGAGAATCCTTCATTTTTCTATGCTGTACAGGGTGATGAAGATCATTGCATGAATAATATCTTCTGGGTTGATCATAAGGCCAGGACTAACTACACTTACTTTGGTGACACTGTCACTGTTGACACAACATATAGGTCGAACCGCTACAGATTGCCTTTTGCACCTTTCACTGGTGTAAACCATCATGGACAGCCTGTATTATTTGGTTGTGCTTTCCTGATAAATGAATCCGAGGCATCTTTTGTCTGGCTGTTCAAAACCTGGCTTGAAGCAATGTCGAGTCGACCTCCAGTTTCAATTACTACTGACCATGATAGGGTGATTCGTGTAGCCGTCAACCATGTCTTTCCTAACACCCGTCACCGATTTTGCAAGTGGCACATTTTTAAAGAATGCCAAGAGAAGTTGTCCCATGTGCTTTCTGAACACCAAAATTTTGAAGCTGACCTCCATAATTGTGTTAACCTGTCAGAGTCCATTGAGGAGTTCGAGTCTTCTTGGTCCTCTCTAATGGATAGGTATGAACTCAAAGAACATGAATGGCTACAAGCAATTTATGGTGATAGGCGGCAGTGGGTTCCAGTGTACTTGAGGGACTCATTTTTCGCAGAAATGTCAATAACACAGCGAAGTGATAGCATTAACTCTTACTTTGATGGATACATCAATGCATCAACAACACTTCAGCTTTTTGTTAAGCAGTATGAGAAGGCTTTGGAGAGCCGTTATGAGAAAGAAGTCAAAGCAGATTATGACACAATAAACACTGCACCAGTTCTGAAGACTCCATCACCCATGGAGAAACAAGCAGCTGGAGTTTACACAAGGAGATTGTTTATCAAATTTCAGGAAGAGTTGGTTGAGACATTAACTTTCTTGGCTAACAAAGTAGAGGAAGAAGAAATGATTACTCTGTATAGAGTAGCTAGATATGGGGAAATTCACAGGGCCTACTTTGTTAGAATTAACATTTCTGAAATAAAAGCTACTTGTAGTTGCCAGATGTTTGAGTTTTCTGGCTTAGTTTGTCGACACATATTGACTGTTTTTAGGGTGACAAATCTTCTTACTTTACCATCTCATTATATTTTAAAAAGATGGAGCAGGAGTGCTAAAAGTGGTGTCGTATTGGAAGAACGTGCCACTGATTTGTTAAATGGTGGACGAGAATCTCTAACTATCCGATACAATAATCTTCGTCATGAGGCCTTTAAGTATGTTGATGAGGGAATAACCTCTCCAGAAGTTTATGATGTGGCTATGAGTGCTCTTCAGGAGGCTGCAAATAAAGTGGCACTTGCATCAAAAAATGGTGGAAGACTGGCTATTTTGAATGGAGCTTGTAACGAAGACCTTCATCAGAGCAATGAAGCAACTTCAAGTTGCAGTGATCCTGCATTTAGTTCACAGCTATCTTCTTCTAAGGATGACCAGGACAGAACAATTGAGAAGTTGAAACGTCAACTTGATCGAACTCAGAGGAAGTGTGAAGTTTATAGGTCCAACTTACTGACAATTTTAAAAGAAGTTGAAGAGCAGAAGCTACAATTATCAGTCAAAGTCCAAAATATCAAGTTAGAGATGAAAGATTGA 2373 0.4197 MEFEPLSLSNEVIEFDMIGLGDDGGIDIEHPVEEDDDLVNVDNSPAAAAAITSPVATVGPHIAGGETILEPHQGMDFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVEKDRNSLDGRVKRPRAETRVGCKAMLVVKIQDSGRWVVSSFVKEHNHELVPPDKVHCLRSHRHVSGPAKSLIDTLQGAGIGPSGIMSALIKEYGGISNIGFTERDCRNYMRSSRQRTLGGDTQILLDYLKSKQAENPSFFYAVQGDEDHCMNNIFWVDHKARTNYTYFGDTVTVDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESEASFVWLFKTWLEAMSSRPPVSITTDHDRVIRVAVNHVFPNTRHRFCKWHIFKECQEKLSHVLSEHQNFEADLHNCVNLSESIEEFESSWSSLMDRYELKEHEWLQAIYGDRRQWVPVYLRDSFFAEMSITQRSDSINSYFDGYINASTTLQLFVKQYEKALESRYEKEVKADYDTINTAPVLKTPSPMEKQAAGVYTRRLFIKFQEELVETLTFLANKVEEEEMITLYRVARYGEIHRAYFVRINISEIKATCSCQMFEFSGLVCRHILTVFRVTNLLTLPSHYILKRWSRSAKSGVVLEERATDLLNGGRESLTIRYNNLRHEAFKYVDEGITSPEVYDVAMSALQEAANKVALASKNGGRLAILNGACNEDLHQSNEATSSCSDPAFSSQLSSSKDDQDRTIEKLKRQLDRTQRKCEVYRSNLLTILKEVEEQKLQLSVKVQNIKLEMKD. 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02131 790 ProSiteProfiles Zinc finger SWIM-type profile. 578 614 IPR007527 GO:0008270
Seca9g02131 790 MobiDBLite consensus disorder prediction 718 735 - -
Seca9g02131 790 SMART 26again6 589 616 IPR006564 GO:0008270
Seca9g02131 790 Pfam SWIM zinc finger 578 612 IPR007527 GO:0008270
Seca9g02131 790 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 65 692 IPR031052 GO:0006355
Seca9g02131 790 MobiDBLite consensus disorder prediction 718 740 - -
Seca9g02131 790 Pfam MULE transposase domain 298 390 IPR018289 -
Seca9g02131 790 Coils Coil 767 787 - -
Seca9g02131 790 Coils Coil 735 762 - -
Seca9g02131 790 Pfam FAR1 DNA-binding domain 86 177 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02131 Seca-Chr9 33606470 33610888 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g02131 MULE 7.7e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02131 - - gmx:100782414 1362.05