Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02118 ATGGTGCTGGTGCAGCTCTTCTATGGTGGCTACCATGTCATCACCAAAGTGGCTCTTAATGTTGGGGTCAACCAACTAGTCTTCTGCCTCTACCGGGATCTCCTTGCCTTCTCTATCATTTCTCCCATCGCTTATTTCAATGAAAGACGGACAAGACCACCCATTACTAAGCAGCTATTGTGGTCATTCTTCCTTCTTGGATTAACTGGGATATTTGGCAACCAGCTCTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCCGTACAACCAGCCATTCCAGTCTTTACATTTCTGTTTGCTGTAATAATGGGTACAGAAAGAGTGAACTTGTTCAGATATGAAGGTCTGGCAAAGGTTGGAGGAACTCTTATCTGTGTTTCTGGTGCGATATTGATGGTTTTTTATCGTGGCCCAGCTTTGATAGGAGACACAGAAATGGACCACATGGCACAGAATGAAGTAAGTGCCAGAGGTCAGCCAGAGCCATCTGGATGGTTAAGCAGTGGTTTACAAGATATTGGTTTAGACCATTTTGAACTTGGGGTTATATGCTTGATAGGGAACTGTATGTGCATGGCTGCTTTTCTAGCTATTCAGGCACCATTATTAAAGAAGTATCCCGCAAACCTATCTGTCACTGCATATTCATTCTTCTTTGGAGTTGTACTAATGGTGATAGCATCGACATTCATGACTAAAGGGTTAACTGACTGGATTTTGACACAATCAGAATTACTTGCTGTTATATATGCTGGAACTATTGCATCTGGCCTTAACTATGGAATCATTACATGGAGCAACAAGATCATAGGGCCAGCTTTGGTTGCTCTTTATATGCCTCTTCAACCTGGTTTTTCCTCCATACTGTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGTATCATAGGGGGATCTTTGATCATTGGTGGTCTTTATACGGTTACTTGGGCATCTTATAGAGAGAGACAAGCAACAGTTGGAGTTACTCCTCATGAGTCATGGGTCTCTGAACCACTTGTTCATGAAAAAAGTGCATACCATAGTCATGGGTCATCCTCCTCCTCCAATGTATCCCCAGACCCAAAGTCATCAGATTAA 1119 0.4218 MVLVQLFYGGYHVITKVALNVGVNQLVFCLYRDLLAFSIISPIAYFNERRTRPPITKQLLWSFFLLGLTGIFGNQLLFLIGLSYTNPTYAAAVQPAIPVFTFLFAVIMGTERVNLFRYEGLAKVGGTLICVSGAILMVFYRGPALIGDTEMDHMAQNEVSARGQPEPSGWLSSGLQDIGLDHFELGVICLIGNCMCMAAFLAIQAPLLKKYPANLSVTAYSFFFGVVLMVIASTFMTKGLTDWILTQSELLAVIYAGTIASGLNYGIITWSNKIIGPALVALYMPLQPGFSSILSQIFLGSPIYLGSIIGGSLIIGGLYTVTWASYRERQATVGVTPHESWVSEPLVHEKSAYHSHGSSSSSNVSPDPKSSD. 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02118 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 35 138 - -
Seca9g02118 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 327 - -
Seca9g02118 372 MobiDBLite consensus disorder prediction 352 372 - -
Seca9g02118 372 MobiDBLite consensus disorder prediction 353 372 - -
Seca9g02118 372 PANTHER WAT1-RELATED PROTEIN 1 329 IPR030184 GO:0016020|GO:0022857
Seca9g02118 372 Pfam EamA-like transporter family 185 322 IPR000620 GO:0016020
Seca9g02118 372 Pfam EamA-like transporter family 2 122 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02118 Seca-Chr9 33496769 33500420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02118 80 351 Nodulin-like Gene Family AT5G45370 60.145 1.05e-118 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02118 - - gmx:100793730 563.533