Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02093 ATGTTCAACACCCTTCCCAATCTCCAAACACTTTTCATTGGTGGGAACCAAATCTCAGGTCCAATCCCATCTTCCATCACAAATGCATCTGTCCTTCAAAAGTTTGATATCACTCAAAACCATTTTGTGGGACAAGTTCCAAGTTTAGGAAAGCTAAAAGATCTTGGTCTCCTAGGTTTGGCTAAGAACAAGCTAGGAAATAACTCAACTAAAGATTTGGAGTTTTTAAAGTCATTGACAAATAGTAGTAAGTTGTATGTGGTTGATATATCCTACAACAATTTTGGAGGCCATTTACCAGATTCCTTGGGAAACATGTCAAACCAAGTCAATAACCTATATCTTGGGGGCAATCATATATCAGGAAATCTAGTTAGCTTATTTCTCTTGACCATGGAAAATAACCGTTTTGAAGGGACAATTCCAGCTACTTTTGGGAAGTTTCAAAAGATGCAAGTGTTAGAATTAAGTGGAAACCAATTGTCAGGAGATATACCAGCCTTCATAGGTAATCTCAGTCAGTTGTCTTATTTGGGTTTAGGACATAATATGTTAGAAGGAAATGTTCCTCCAAGTATAGGAAACTGTCAAAAGTTACAACACCTAGACCTTTCACACAACAACCTTAGAGGAACCATACCTGTGGAGGTTTTTAGTCTTTTCTCTTTAACAAACTTATTGGACTTGTCACAAAACTCATTTAGTGGTACTATAGTGGAAGAAGTAAGCATGCTAAAAAATATTGAAACATTGAATGTCTCTGAGAATCATCTGTCTGGTGATATTCCTAGAACCATTGGAGAATGCATAAGCTTGGAGTACCTTTATTTGCAAGGAAATTCCTTAAATGGAGTCATACCATCTTCTTTGGCTTCACTCAAAGGCCTTAGACGTTTAGACTTATCAAGAAACCGTTTTTCTGGATCAATTCCTGAAGGTCTACAGAATATTGCTTTCTTAGAATACTTCAATGTTTCTTTTAACATGTTGGATGGTGAGGTACCAACTAAAGGTGTCTTTCAAAATGCAAGTGAGGTGGTGGTAACTGGAAACAATAACCTTTGTGGAGGTATTTCAAAGCTGCATCTACCACCATGCCCTGTCAAAGGTAAGGAACATGCAAAACACCATAGTTACAAGCTGATAGCAGTGATAGTTAGTGTGGTTGCTTTTCTTCTAATACTTCTATTTATTCTAACTATCTATTGTATGAGGAAAAGAAACAAGAAACCAACTATTGATTCACCAGAAATTGACCACCTGGCTAAGGTTTCTTATGAAAACCTATACAATGGAACTGATGGATTCTCAACTAGAAACTTGATAGGATCTGGAAATTTTGGACATGTCTACATAGGAACTCTTGAGTCAGAAGATAGAGTTGTTGCCATAAAGGTCCTAAACCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTGCTGAATGTAATGCACTCAAAAATATTAGGCATCGAAATCTGGTTAAGATCTTAACATGCTGTTCTAGTACAGATTACAAAGGTCAAGAATTTAAAGCTTTGGTTTTTGAGTACATGAAAAATGGAAGCTTAGAGAGTTGGTTGCATCCAGAAACAGAAATTGCAGATCCACAAAAATCATTGAGCCTTGAGCAAAGGTTAAATATTATTACTGATGTTGCTTTAGCATTTCATTATCTTCACTATGAATGTGAGGAGCCAGTCATTCATTGTGATTTAAAGCCTAGCAATGTTCTTATTGATGAATGCATGGTAGCACACGTGAGTGATTTTGGCTTAGCAAGATTGCTCTCAAGAGTTGGAGTATCTCTGATGCAAAGTAGCACAATTGGAATTAAGGGGACAGTTGGTTATGCACCTCCAGAGTATGGAATGGGTTCTGAGGTGTCAATTGAAGGTGACATCTATAGCTTTGGCATTCTAGTTCTTGAGATGTTAACTGGAAGGAGGCCAACAGATGAAATGTTTGAAGATGGTCATAATCTCCATAATTATGTTAAAATTTCAATTTCAAATGACCTTTTGCATATAGTGGATCCAGCTATTCTCCACAATGGATTAAAATGGGCTACTGACAGTGGGGACCTTGGCATTATACATCCTAATGTAGAGAAATGTTTACTTTCACTTTTTAGTATTGCACTTGCCTGTTCAGTGGAATCTCCAAAAGAAAGAATGAGTATGGTTGATGTCATAAGGGAGCTTAATATTATCAAGAACGCAACTGCCTCTTCGGCTTTCGGAAATGAGACCGACCATTTGGCTTTGCTGAAATTGAAGGAATCAATATCCAATGACCCCTTTGGAATTCTACATTCTTGGAATGCTTCTACCCATTTCTGTAACTGGCATGGAGTCACATGCATGCACCAAAGAGTAACACAGTTGAACCTACCAGCATATCAGTTGCATGGATCCTTGTCTCCTCATGTTGGTAATCTCTCTTTTTTGAGAAACCTTAATCTTGAAAACAACAGTTTCTATGGAAATATCCCACCAGAATTGGGTCGGTTGTTACAAATGCAGAATCTCTATCTCTCCAACAACTCCTTCACAGGGGAGATTCCTACAAACTTGACAACTTGCTCTCATCTCAAGTTCTTAGAATTGAGCCAAAACAAACTCTTAGGACACATACCAGCCTTCATAGGAAATCTCAGTCAATTGTTTTATTTGGGTTTATCAAAGAATATGTTAGAAGGAAATATTCCTCCAAGCATAGGAAACTGCCAAAAGTTGCAATCCCTAAAGCTTTCGCAAAACAACCTTAGAGGAACCATACCCTCTGAGGTTTTTAGCCTTTCCTCATTAACAAAATCATTGGACTTGTCACAAAACTCTTTGAGCGGCACTCTCCCTGGTGAAGTAGGCAAGCTAAAAAATATCGATTGGCTGGATCTCTCTGAGAATCATCTGTCCGGAAACATTCCTGGAACCATTGGAGAATGCATGAGCTTGGAGTACCTTTATTTGCAAGGAAATTCCTTCCATGGAATCATGCCATCCTCCTTGGCTTCACTCAAAGGCCTTCGACGTTTAGACCTATCACGAAACCGCTTGTCTGGATCAATTCCTAAAGGTCTACGGAACATTTCCTTCCTAGAATACTTGAATGTTTCTTTCAACATGTTGGATGGTGAAGTACCAACAGAAGGTGTCTTTCTAAATGCAAGTGCCTTAACGGTGATTGGAAACAACAACCTTTGTGGAGGTATTTCAAAGTTGCATTTACCGCCATGCCCTGTCAAAGGTATGAAACATGCTAAACACCATAAGTTGATGGCAGTGATAGTTAGTGTGGTTGCTTTTTTTTTCATACTATCTCTTGTTCTAACTATCTACTGGATGAGGACAAGAAACAAGAAACCATCTTCTCATTCACCAACAATTGATCAACTGCCTAAGGTTTCATACCAAGATCTACACAATGGAACCAATGGGTTCTCAACTACAAACTTGGTGGGATATGGAAATTTTGGCTCTGTCTACAAAGGAACTCTTGAGTCAGAAAATAGAGGACTTGTTGCCATAAAGGTCCTAAACCTTCAAAAGAAGGGAGCACACAAGAGTTTTATTGCTGAATGTGATGCACTCAAAAATATTAGACATCGAAACCTGGTTAAGATTCTGACATGTTGTTCCAGTGCAGATTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTGAGTATATGAACAATGGGAGCTTAGAAAGTTGGTTGCATTCACCAACAGAAAATAATACAGATCAGCCCAAATCATTGAACCTTGAGCAAAGGTTTAGTATTATTTCCGATGTTGCTTCAGCAGTTCATTATCTTCATTGTGAATGTGAGGAGCCTGTCATTCATTGTGATTTAAAGCCTAGCAACGTTCTTCTTGATGAATGTATGGTAGCTCACGTGAGTGATTTTGGCTTAGCAAGATTGCTCTCAAGTGTTGGAGTCTCTTTGAAGCAAAGTAGCACAATTGGAATAAAGGGGACTATTGGTTATGCACCTCCAGGTATATCATCACATTATTTTGTTAAGTTGTGA 4032 0.3819 MFNTLPNLQTLFIGGNQISGPIPSSITNASVLQKFDITQNHFVGQVPSLGKLKDLGLLGLAKNKLGNNSTKDLEFLKSLTNSSKLYVVDISYNNFGGHLPDSLGNMSNQVNNLYLGGNHISGNLVSLFLLTMENNRFEGTIPATFGKFQKMQVLELSGNQLSGDIPAFIGNLSQLSYLGLGHNMLEGNVPPSIGNCQKLQHLDLSHNNLRGTIPVEVFSLFSLTNLLDLSQNSFSGTIVEEVSMLKNIETLNVSENHLSGDIPRTIGECISLEYLYLQGNSLNGVIPSSLASLKGLRRLDLSRNRFSGSIPEGLQNIAFLEYFNVSFNMLDGEVPTKGVFQNASEVVVTGNNNLCGGISKLHLPPCPVKGKEHAKHHSYKLIAVIVSVVAFLLILLFILTIYCMRKRNKKPTIDSPEIDHLAKVSYENLYNGTDGFSTRNLIGSGNFGHVYIGTLESEDRVVAIKVLNLQKKGAHKSFIAECNALKNIRHRNLVKILTCCSSTDYKGQEFKALVFEYMKNGSLESWLHPETEIADPQKSLSLEQRLNIITDVALAFHYLHYECEEPVIHCDLKPSNVLIDECMVAHVSDFGLARLLSRVGVSLMQSSTIGIKGTVGYAPPEYGMGSEVSIEGDIYSFGILVLEMLTGRRPTDEMFEDGHNLHNYVKISISNDLLHIVDPAILHNGLKWATDSGDLGIIHPNVEKCLLSLFSIALACSVESPKERMSMVDVIRELNIIKNATASSAFGNETDHLALLKLKESISNDPFGILHSWNASTHFCNWHGVTCMHQRVTQLNLPAYQLHGSLSPHVGNLSFLRNLNLENNSFYGNIPPELGRLLQMQNLYLSNNSFTGEIPTNLTTCSHLKFLELSQNKLLGHIPAFIGNLSQLFYLGLSKNMLEGNIPPSIGNCQKLQSLKLSQNNLRGTIPSEVFSLSSLTKSLDLSQNSLSGTLPGEVGKLKNIDWLDLSENHLSGNIPGTIGECMSLEYLYLQGNSFHGIMPSSLASLKGLRRLDLSRNRLSGSIPKGLRNISFLEYLNVSFNMLDGEVPTEGVFLNASALTVIGNNNLCGGISKLHLPPCPVKGMKHAKHHKLMAVIVSVVAFFFILSLVLTIYWMRTRNKKPSSHSPTIDQLPKVSYQDLHNGTNGFSTTNLVGYGNFGSVYKGTLESENRGLVAIKVLNLQKKGAHKSFIAECDALKNIRHRNLVKILTCCSSADYKGQEFKALVFEYMNNGSLESWLHSPTENNTDQPKSLNLEQRFSIISDVASAVHYLHCECEEPVIHCDLKPSNVLLDECMVAHVSDFGLARLLSSVGVSLKQSSTIGIKGTIGYAPPGISSHYFVKL. 1344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02093 1343 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 518 746 - -
Seca9g02093 1343 Pfam Leucine rich repeat 130 185 IPR001611 GO:0005515
Seca9g02093 1343 Pfam Leucine rich repeat 911 971 IPR001611 GO:0005515
Seca9g02093 1343 Pfam Leucine rich repeat 271 330 IPR001611 GO:0005515
Seca9g02093 1343 Pfam Leucine rich repeat 984 1043 IPR001611 GO:0005515
Seca9g02093 1343 FunFam LRR receptor-like serine/threonine-protein kinase EFR 1118 1229 - -
Seca9g02093 1343 Gene3D Ribonuclease Inhibitor 1 367 IPR032675 -
Seca9g02093 1343 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1230 1340 - -
Seca9g02093 1343 Gene3D Transferase(Phosphotransferase) domain 1 1230 1340 - -
Seca9g02093 1343 Gene3D Transferase(Phosphotransferase) domain 1 518 754 - -
Seca9g02093 1343 SMART LRR_sd22_2 148 174 - -
Seca9g02093 1343 SMART LRR_sd22_2 5 31 - -
Seca9g02093 1343 SMART LRR_sd22_2 1006 1032 - -
Seca9g02093 1343 SMART LRR_sd22_2 196 217 - -
Seca9g02093 1343 SMART LRR_sd22_2 861 887 - -
Seca9g02093 1343 SMART LRR_sd22_2 293 316 - -
Seca9g02093 1343 PANTHER OS04G0122200 PROTEIN 5 738 - -
Seca9g02093 1343 SMART serkin_6 436 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02093 1343 SUPERFAMILY L domain-like 830 1069 - -
Seca9g02093 1343 ProSiteProfiles Protein kinase domain profile. 436 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02093 1343 Pfam Leucine rich repeat N-terminal domain 749 787 IPR013210 -
Seca9g02093 1343 FunFam LRR receptor-like serine/threonine-protein kinase EFR 71 372 - -
Seca9g02093 1343 Gene3D Ribonuclease Inhibitor 755 858 IPR032675 -
Seca9g02093 1343 FunFam LRR receptor-like serine/threonine-protein kinase EFR 781 1085 - -
Seca9g02093 1343 ProSiteProfiles Protein kinase domain profile. 1147 1343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02093 1343 SUPERFAMILY Protein kinase-like (PK-like) 412 736 IPR011009 -
Seca9g02093 1343 ProSiteProfiles Leucine-rich repeat profile. 198 220 IPR001611 GO:0005515
Seca9g02093 1343 FunFam LRR receptor-like serine/threonine-protein kinase EFR 407 517 - -
Seca9g02093 1343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Seca9g02093 1343 ProSitePatterns Protein kinases ATP-binding region signature. 442 465 IPR017441 GO:0005524
Seca9g02093 1343 Pfam Protein kinase domain 438 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02093 1343 Pfam Protein kinase domain 1149 1333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02093 1343 Gene3D Ribonuclease Inhibitor 859 1074 IPR032675 -
Seca9g02093 1343 SUPERFAMILY Protein kinase-like (PK-like) 1120 1336 IPR011009 -
Seca9g02093 1343 SMART LRR_typ_2 5 29 IPR003591 -
Seca9g02093 1343 SMART LRR_typ_2 885 909 IPR003591 -
Seca9g02093 1343 SMART LRR_typ_2 984 1005 IPR003591 -
Seca9g02093 1343 SMART LRR_typ_2 910 933 IPR003591 -
Seca9g02093 1343 SMART LRR_typ_2 245 269 IPR003591 -
Seca9g02093 1343 SMART LRR_typ_2 1006 1029 IPR003591 -
Seca9g02093 1343 SMART LRR_typ_2 172 196 IPR003591 -
Seca9g02093 1343 SMART LRR_typ_2 197 220 IPR003591 -
Seca9g02093 1343 SMART LRR_typ_2 958 982 IPR003591 -
Seca9g02093 1343 SMART LRR_typ_2 813 837 IPR003591 -
Seca9g02093 1343 SMART LRR_typ_2 293 316 IPR003591 -
Seca9g02093 1343 Gene3D Phosphorylase Kinase; domain 1 417 517 - -
Seca9g02093 1343 Gene3D Phosphorylase Kinase; domain 1 1128 1229 - -
Seca9g02093 1343 Pfam Leucine Rich repeat 195 211 IPR001611 GO:0005515
Seca9g02093 1343 SUPERFAMILY RNI-like 2 337 - -
Seca9g02093 1343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1280 1292 IPR008271 GO:0004672|GO:0006468
Seca9g02093 1343 ProSitePatterns Protein kinases ATP-binding region signature. 1153 1177 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02093 Seca-Chr9 33087431 33098336 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02093 5 738 Receptor kinase-like Gene Family AT3G47570 46.817 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Seca9g02093 Pkinase 3.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02093 - - aprc:113870110 1065.83