Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02086 ATGAAGCCCTTTACTGTCATGTTACCTGCATTCTGGTCTATATGCCTTCACATACTTGTGCTACTTTTTATTTTGAGCTCACTCTCGTTTGGCCCAAACTCAACTGCCTCTTTTGATTTCGGAAACGAGACTGACCATTTGGCGTTGCTGAAATTGAAGGAATCAATATCCAATGACCCATTTGGAGTGTTGGTCTCTTGGAATGCTTCTATCCATTTCTGTGAGTGGCATGGAATCACATGCATGCACCAAAGAGTAACAGAGTTGAACTTACAAGGATATCAGTTGCATGGATCCTTATCTCCTCACATTGGCAATCTTTCCTTTCTAACAAACCTCAACCTTAGGAACAACAGTTTCTATGGAAAAATCCCACCAGAATTGGGTCGGTTGTTACAATTGCAGCAACTTGCTCTCACCAATAACTCCTTCACAGGGGAGATTCCTACAGACTTGACAAGTTGTTCTGATCTTGAAATCTTATTCTTAACGGGAAATAATCTGACTGGCAAAATACCAATTGAGATTGGCTCTCTTCAGAAGCTTCAATCATTGGCAGTTGGGAAAAATAATTTAATTGGAGGATTCCCGCCATTTATAGGGAATCTCTCATCACTTACTACTCTCTCGGTGCCTTATAATAACTTGGAGGGAGATATTCCAAAAGAAATATGCAGACTCAAAAACTTGACATGGATAGCAGTGGATATGAACATACTATCTGGTACATTTCCTTCTTGCCTTTACAATATGTCATCTCTTATTGTGATCTCAGCTGCACGAAATTACTTTGATGGCATTCTTCCACCCAACATGTTCAACACCCTCCCCAATCTCCAATTCTTTTCAATTTCCGGGAATCAATTCTCAGGTCCAATCCCCACTTCCATGGTGAATGTGTCTACCCTTACACAACTTGATATCGGTCGAAATAATTTTGTCGGACGAGTTCCAAGTCTAGAGAAGCTACAAGATCTTCAGTTGTTAAATTTGGAACTTAATTATCTAGGTGGAAATTCAACTAAGGATTTGGAGTTTTTAAAATCATTGACAAACTGTAGTAAGTTACTAAAGATCTCTATATCCTATAATAATTTTGGAGGTAGTTTACCGAATTCTGTGAGCAATCTTTCCACTCAACTCAATTACCTATATCTTGGAGGTAACCACATATCTGGAAAAATTCCTGCGGAATTAGGAAATTTAATTAGCCTAACATGGTTGAGCATGGAAAATAACCACTTTCAAGGGATTATCCCAGCTACTTTCGGGAAGTATATAAAGATGCAAAAGCTAAACTTGGGTGGAAACAAACTTTCAGGAAATATACCAGCCTTCATAGGAAATCTCAGTCAATTGTTTTATTTGGATTTATCAAAAAATATGTTAGAAGGAAATATTCCTCCAAGCATAGGAAACTATCAAAGGTTACAATACCTCAACCTCTCACAAAACAACCTTAGAGGAACCATACCCTCTGAGGTTTTTAGCCTTTCCTCATTAACAAATTTACTAGACTTGTCACAAAACTCTTTGAGTGGAACTCTCCTTAGTGAAGTGGACATGTTAACAAACATTGATTGGCTGGATCTCTCTGAGAATCATCTGTCTGGAAACATTCCTGGAACTATTGGACAATGCATGAGATTGGAGTACCTTTATTTGCAAGGAAATTCCTTCCATGGAATCATGCCATCCTCCTTGGCTTCACTCAAAGGACTTCAACGTGTAGACCTATCACGAAACAGCTTGTCTGGATCAATTCCCAAAGGTTTCCAAAATATTTCATTTTTAGAATACTTGAATGTTTCTTATAACAAGTTGAATGGTGAGGTACCAACAGAAGGTGTCTTTCAAAATGCAAACAAGTTAGGAGTGGCTGGAAACAATAAGCTTTGTGGAGGTATTCCAGAGTTGCATCTACCGCCATGCCCTGTCAAAGATATGAAACATGCAAAACACCATAAGTTGATGGCAGTGATAGTTAGTGTGGTTGCTTTTCTTTTCATATTATCCCTTGTTCTAACTATCTACTGGATGAGGACAAGAAACAAGAAACCATCTTCTGATGAATCAACAATTGGTCAGTTGTCTAAGGTCTCATACCAAGACCTATATCATGGAACCGATGGGTTCTCGGCTGAAAACTTGATTGGATCAGGAAGTTTTGGTTCTGTCTACAAAGGAAATCTTATGTCAGAAGATGATGTTGTTTCCGTAAAGGTGTTGAACCTTCAAAGGAAAGGAGCTCACAAGAGTTTCATTACTGAATGCAATGCACTTAAAAATATTAGACATCGAAATCTGGTTAAGATTTTAACATGTTGTTCCAGTACAGATTACAAAGGTCAAGAATTTAAAGCTCTAGTTCTTGAGTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCAAGGACAGGAGGTGAAGAGCATCCAAGAACACTAGACCTTGATCAAAGATTAAATATCATTATGGATGTTGCTTCTGCATTACATTATCTTCATCTTGAATGTGAGCAAATGGTCCTTCATTGTGATCTGAAGCCAAGCAATATCCTACTTGATGATGACATGGTTGCTCATGTGAGTGACTTTGGTATAGCAAGACTTGTCTCAACCATTGACGGTATCTCTCAGAAGCAAACTAGTACAGTTGGAATAAAAGGGACTGTTGGCTATGCTCCTCCAGAGTATGGAGTAGGTTCTGAAGTGTCCACACATGGTGACATGTATAGCTTCGGGATTCTTGTGTTGGAAATGCTTACCGGAAGAAGACCAACCGATGAAGTGTTTGAAGATGGTCAAAATCTGCATAAGTTTGTTGAGATTTCATTTCCTGATAATCTTTTACAGATTTTGGACCCATCTCTTTTACCAAGAGATCTAGAAGCAGCAAGAGAAGAAGAAATTAGTGGGGATCTAATTTTAACTGTAAAGAAGTTCTTAGTTTCACTTTTTAGGATTGGACTTGCTTGTTCAGTGGAATCACCAAGAGAAAGAATGAGTATAGTGGATGTCATTAGAGAGTTAAACAAAATCAGAAACGCCTTTCTCAATGATCTCATTGGAGAGCTTGAACTCACATGCATAAGTTCTGGCCAAGGGTTCAAATCTGATAGATATGTCTTCCTCCATACATGA 3144 0.3839 MKPFTVMLPAFWSICLHILVLLFILSSLSFGPNSTASFDFGNETDHLALLKLKESISNDPFGVLVSWNASIHFCEWHGITCMHQRVTELNLQGYQLHGSLSPHIGNLSFLTNLNLRNNSFYGKIPPELGRLLQLQQLALTNNSFTGEIPTDLTSCSDLEILFLTGNNLTGKIPIEIGSLQKLQSLAVGKNNLIGGFPPFIGNLSSLTTLSVPYNNLEGDIPKEICRLKNLTWIAVDMNILSGTFPSCLYNMSSLIVISAARNYFDGILPPNMFNTLPNLQFFSISGNQFSGPIPTSMVNVSTLTQLDIGRNNFVGRVPSLEKLQDLQLLNLELNYLGGNSTKDLEFLKSLTNCSKLLKISISYNNFGGSLPNSVSNLSTQLNYLYLGGNHISGKIPAELGNLISLTWLSMENNHFQGIIPATFGKYIKMQKLNLGGNKLSGNIPAFIGNLSQLFYLDLSKNMLEGNIPPSIGNYQRLQYLNLSQNNLRGTIPSEVFSLSSLTNLLDLSQNSLSGTLLSEVDMLTNIDWLDLSENHLSGNIPGTIGQCMRLEYLYLQGNSFHGIMPSSLASLKGLQRVDLSRNSLSGSIPKGFQNISFLEYLNVSYNKLNGEVPTEGVFQNANKLGVAGNNKLCGGIPELHLPPCPVKDMKHAKHHKLMAVIVSVVAFLFILSLVLTIYWMRTRNKKPSSDESTIGQLSKVSYQDLYHGTDGFSAENLIGSGSFGSVYKGNLMSEDDVVSVKVLNLQRKGAHKSFITECNALKNIRHRNLVKILTCCSSTDYKGQEFKALVLEYMKNGSLEQWLHPRTGGEEHPRTLDLDQRLNIIMDVASALHYLHLECEQMVLHCDLKPSNILLDDDMVAHVSDFGIARLVSTIDGISQKQTSTVGIKGTVGYAPPEYGVGSEVSTHGDMYSFGILVLEMLTGRRPTDEVFEDGQNLHKFVEISFPDNLLQILDPSLLPRDLEAAREEEISGDLILTVKKFLVSLFRIGLACSVESPRERMSIVDVIRELNKIRNAFLNDLIGELELTCISSGQGFKSDRYVFLHT. 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02086 1047 Gene3D Transferase(Phosphotransferase) domain 1 794 1022 - -
Seca9g02086 1047 Pfam Leucine rich repeat 549 608 IPR001611 GO:0005515
Seca9g02086 1047 Pfam Leucine rich repeat 404 463 IPR001611 GO:0005515
Seca9g02086 1047 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 348 1012 - -
Seca9g02086 1047 Gene3D Phosphorylase Kinase; domain 1 675 793 - -
Seca9g02086 1047 Pfam Protein kinase domain 714 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02086 1047 SUPERFAMILY Protein kinase-like (PK-like) 685 1011 IPR011009 -
Seca9g02086 1047 Gene3D Ribonuclease Inhibitor 44 153 IPR032675 -
Seca9g02086 1047 ProSiteProfiles Protein kinase domain profile. 712 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02086 1047 CDD STKc_IRAK 718 1014 - -
Seca9g02086 1047 SMART serkin_6 712 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02086 1047 FunFam LRR receptor-like serine/threonine-protein kinase EFR 683 793 - -
Seca9g02086 1047 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Seca9g02086 1047 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 794 1023 - -
Seca9g02086 1047 Gene3D Ribonuclease Inhibitor 154 249 IPR032675 -
Seca9g02086 1047 FunFam LRR receptor-like serine/threonine-protein kinase EFR 346 650 - -
Seca9g02086 1047 SMART LRR_typ_2 107 131 IPR003591 -
Seca9g02086 1047 SMART LRR_typ_2 523 547 IPR003591 -
Seca9g02086 1047 SMART LRR_typ_2 402 425 IPR003591 -
Seca9g02086 1047 SMART LRR_typ_2 450 474 IPR003591 -
Seca9g02086 1047 SMART LRR_typ_2 203 227 IPR003591 -
Seca9g02086 1047 SMART LRR_typ_2 595 620 IPR003591 -
Seca9g02086 1047 SMART LRR_typ_2 475 498 IPR003591 -
Seca9g02086 1047 SMART LRR_typ_2 571 594 IPR003591 -
Seca9g02086 1047 Gene3D Ribonuclease Inhibitor 250 645 IPR032675 -
Seca9g02086 1047 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 80 345 - -
Seca9g02086 1047 SUPERFAMILY L domain-like 379 634 - -
Seca9g02086 1047 Pfam Leucine rich repeat N-terminal domain 43 81 IPR013210 -
Seca9g02086 1047 SUPERFAMILY L domain-like 42 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02086 Seca-Chr9 33016208 33020523 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02086 40 1019 Receptor kinase-like Gene Family AT3G47570 46.633 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Seca9g02086 Pkinase 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02086 - - gmx:100801459 1367.83