Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02084 ATGAACAATGGAAGCTTAGAAAGCTGGTTGCATCCCACAACAGAAAATACAGATCAGTCCAAATCACTGACCCTTGAGCAAAGGTTAAATATTATTACTGATGTTGCTTCAGCAGTTCATTATCTTCACTATGAATGTGAGCAACCTATCATTCATTGTGATTTAAAGCCTGGCAACGTTCTTCTTGATGAATGTATGGTAGCTCACGTGAGTGATTTTGGCTTAGCAAGATTGCTCTCAAGTGTTGGAGTCTCTCTGAAGCAAAGTAGCACAATTGGAATAAAGGGGACTATTGGTTATGCACCTCCAGAGTATGGAATGGGTTCTGAGGTGTCAATTGAAGGTGACATGTATAGCTTTGGAATTCTGGTTTTAGAAATGTTAATTGGAAAGAGGCCCACAGATGAAATGTTTAAAGATGGTCTCAATCTCCATAGTTATGTTGAAAATTCCATTTCAAATCACCTTTTGCAAATTGTGGACCTGACTCTTCTCCCCAATGGATTAGAACAAGCCACTGACAATGGCATGCATCTGAATGTGGAGAAATGTTTACTTTCACTTTTTAGGATTGCGCTTTCTTGTTCAGTGGAATCACCAAGAGAAAGAATGAGTATGGTTGGTTGA 627 0.3907 MNNGSLESWLHPTTENTDQSKSLTLEQRLNIITDVASAVHYLHYECEQPIIHCDLKPGNVLLDECMVAHVSDFGLARLLSSVGVSLKQSSTIGIKGTIGYAPPEYGMGSEVSIEGDMYSFGILVLEMLIGKRPTDEMFKDGLNLHSYVENSISNHLLQIVDLTLLPNGLEQATDNGMHLNVEKCLLSLFRIALSCSVESPRERMSMVG. 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02084 208 SMART serkin_6 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02084 208 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Seca9g02084 208 SUPERFAMILY Protein kinase-like (PK-like) 1 206 IPR011009 -
Seca9g02084 208 Pfam Protein kinase domain 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02084 208 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1 208 - -
Seca9g02084 208 ProSiteProfiles Protein kinase domain profile. 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02084 208 Gene3D Transferase(Phosphotransferase) domain 1 1 207 - -
Seca9g02084 208 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02084 Seca-Chr9 33009502 33010587 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02084 1 207 Receptor kinase-like Gene Family AT3G47110 50.000 6.10e-61 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Seca9g02084 Pkinase 3.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02084 - - gmx:100792724 324.324