Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02081 ATGAAGCCCTTATCTGTCATGTTACCTGCATTCTGGTCTATATGCCTTCACATACTTGTGCTATTATTTATTTTGAGCTCACTCTCGTTTGGCCCAAACGCAACTGCCTCTTCTGCTTTGGGAAACGATACCGACCATTTGGCGTTGCTGAAATTCAAGGATTCAATATCCAATGACCCATTTGGAGTGTTGGTCTCTTGGAATGCTTCTACCCATTTCTGCGACTGGCATGGAGTCACATGTATGCACCAAAGAGTAACAGAGTTGAACCTACAAGGATATCAGCTGCATGGATCCTTGTCTCCACATGTTGGTAATCTCTCTTTTCTGAGAAACCTTAATCTGGAAAACAACAGTTTCTATGGAAATATCCCACAAGAATTGGGTAGGTTGTTACAATTGCAGAAACTCCTTCTCCCCAATAACTCCTTCACAGGGGAGATTCCTACAAACTTGTCAAGTTGCTCTCATCTCCAAGCCTTATTCTTAACAGGGAATAATCTGATTGGCAAAATACCAATTGGAATCGGCTCTCTTCAGAAGCTTCAAACATTGACGGTTGCGAAAAACAATTTAACAGGAAGAATCCCACCTTTCATAGGGAATCTTTCATCCCTCATTCGTGTCTCGGTGACTTACAATAACTTTGAGGGAGAAATTCCACAACAAATATGCCATCTCAAAAACCTGACAATGATAACAATGGATATGAACAAACTATCTGGTACATTTCCTACTTGCCTTTACAATATGTCATCTCTTATTGTGATCTCAGCTACAGGAAATAACTTTGATGGCACTCTTCCACCCAACATGTTCAACACCCATTTCCTTCCTAATCTCCAATTTTTTTCAATTGGCCTGAATCAATTTTCTGGTCCAATCCCCACTTCCTTAGCAAATGCTTCTTTCCTTACACTACTTGTTATCGCTGAAAACCATTTTGTCGGACTAGTTCCAAGACTAGGAAAGCTGCAAGATCTACGCTTGTTAAATTTGGAAGGGAATAATCTTGGTGGCAATTCAACTAAGGATTTGGAGTTTTTAAATTCATTGACAAACTGCAGTAAGTTACAGACGATCTCTATAGCCAACAATAATTTTGGAGGTCGTTTGCCTATTTCCGTGGGGAATTTATCCACCCAACTCAATGTACTATTTATTGGGGATAACCAAATATCAGGAGAAATTCCTGCGGAATTAGGAAATTTAATTAGTTTAACAAGCTTGAGCATGGAAAATAACCATTTTCAAGGGACTATTCCAACTACTTTAAGCAAGTTTTTGAAAATGCAAAGGCTAAACTTGGGTGGAAACCAGCTATCAGGAAATATACCAGCCTTCATAGGAAATCTCAGTCAATTGTTTTATTTGGATTTATCAAAAAATATGTTAGAAGGAAATATTCCTCCAAGCATAGGAAACTGTCAAAGGTTACAACACCTAAACCTTTCGCAAAACAATCTTAGAGGAACCATACCCTCTGAGGTTTTTAGCCTTTCCTTATTAACAAACTTACTGGACTTGTCACAAAACTCTTTGAGTGGCACTCTCCCTGCTGAAGTGGGCAGGTTAACAAACATCGATTGGTTGGATCTCTCTGAGAATCATCTGTCTGGAAACATTCCTGGAACCATTGGACAGTGCATGAGATTGGAGTATCTTTATTTGCAAGGAAATTCCTTCTATGGAATCATGCCATCCTCCCTGGCTTCACTCAAAGGCCTTCAACGTGTAGACCTATCACGAAACAACTTGTCTGGATCAATTCCAAAAGGTTTCCAAAATATTTCATATTTAGAATACTTGAATGTTTCTTATAACATGTTGAATGGTGAGGTACCAACAGAAGGCGTCTTTCAAAATACAAGCAAGTTAGGAGTGGCCGGAAACAATAAGCTTTGTGGAGGTATTCCAGAGTTGCATCTACCGCCATGCCCTGTCAAAGGTATGAAACATGCAAAACACCATAAGTTGATGGCAGTGATAGTTAGTGTGGTTGCTTTTCTTCTCATATTATCCCTTGTTCTAACTATCTACTGGATGAGGACAAGAAACAAGAAACCATCTTCTGATGAATCAACAATTGGTCAGTTGTCTAAGGTCTCATACCAAGACCTATATCATGGAACCGATGGGTTCTCGGCTGAAAACTTGATTGGATCAGGAAGTTTTGGTTCTGTCTACAAAGGAAATCTTATGTCAGAAGATGATGTTGTTGCCGTAAAGGTGTTGAACCTTCAAAGGAAAGGAGCTCACAAGAGTTTCATTACTGAATGCAATGCACTTAAAAATATTAGACATCGAAATCTGGTTAAGATTTTAACATGTTGTTCCAGTACAGATTACAAAGGTCAAGAATTTAAAGCTCTAGTTCTTGAGTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCAAGGACGGGAGGTGAAGAGCATCCAAGAACACTAGACCTTGATCAAAGATTAAATATCATTATGGATGTTGCTTCTGCATTAAATTATCTTCATCTTGAATGTGAGCAATTGGTCCTTCATTGTGATTTGAAGCCAAGCAATATCCTACTTGATGATGACATGGTTGCTCATGTGAGTGACTTTGGCATAGCAAGACTTGTCACAACCATTGATGGTACCTCCCACAATCAAACTAGTACAATTGGAATAAAAGGGACTGTTGGCTATGCTCCCCCAGAGTATGGAGTAGGTTCTGAAGTGTCCACACATGGTGACATGTATAGCTTCGGGATTCTTGTGTTAGAAATGCTTACTGGAAGAAGACCAACCGATGAAATGTTTGAAGATGGTCAAAATCTGCATAAGTTTGTTGAGATTTCATTTCCTGATAATCTTTTACAGATTTTGGACCCACCTCTTGTACCAACAGATGAAGAATCAACAAGAGAAGAAGAAATTAGTGGGAATCTCATTTTAACTGTAAAGAAGTGCTTTGTTTCACTTTTTAGGATTGGACTTGCTTGTTCAGTGGAATCACCAAGAGAAAGAATGAATATAGTGGATGTCATTAGAGATCTAAACAAAATCAGAAAGGCCTTTCTCAATGGTGAGTTTTGA 3078 0.3886 MKPLSVMLPAFWSICLHILVLLFILSSLSFGPNATASSALGNDTDHLALLKFKDSISNDPFGVLVSWNASTHFCDWHGVTCMHQRVTELNLQGYQLHGSLSPHVGNLSFLRNLNLENNSFYGNIPQELGRLLQLQKLLLPNNSFTGEIPTNLSSCSHLQALFLTGNNLIGKIPIGIGSLQKLQTLTVAKNNLTGRIPPFIGNLSSLIRVSVTYNNFEGEIPQQICHLKNLTMITMDMNKLSGTFPTCLYNMSSLIVISATGNNFDGTLPPNMFNTHFLPNLQFFSIGLNQFSGPIPTSLANASFLTLLVIAENHFVGLVPRLGKLQDLRLLNLEGNNLGGNSTKDLEFLNSLTNCSKLQTISIANNNFGGRLPISVGNLSTQLNVLFIGDNQISGEIPAELGNLISLTSLSMENNHFQGTIPTTLSKFLKMQRLNLGGNQLSGNIPAFIGNLSQLFYLDLSKNMLEGNIPPSIGNCQRLQHLNLSQNNLRGTIPSEVFSLSLLTNLLDLSQNSLSGTLPAEVGRLTNIDWLDLSENHLSGNIPGTIGQCMRLEYLYLQGNSFYGIMPSSLASLKGLQRVDLSRNNLSGSIPKGFQNISYLEYLNVSYNMLNGEVPTEGVFQNTSKLGVAGNNKLCGGIPELHLPPCPVKGMKHAKHHKLMAVIVSVVAFLLILSLVLTIYWMRTRNKKPSSDESTIGQLSKVSYQDLYHGTDGFSAENLIGSGSFGSVYKGNLMSEDDVVAVKVLNLQRKGAHKSFITECNALKNIRHRNLVKILTCCSSTDYKGQEFKALVLEYMKNGSLEQWLHPRTGGEEHPRTLDLDQRLNIIMDVASALNYLHLECEQLVLHCDLKPSNILLDDDMVAHVSDFGIARLVTTIDGTSHNQTSTIGIKGTVGYAPPEYGVGSEVSTHGDMYSFGILVLEMLTGRRPTDEMFEDGQNLHKFVEISFPDNLLQILDPPLVPTDEESTREEEISGNLILTVKKCFVSLFRIGLACSVESPRERMNIVDVIRDLNKIRKAFLNGEF. 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02081 1025 SUPERFAMILY L domain-like 381 636 - -
Seca9g02081 1025 SUPERFAMILY L domain-like 43 338 - -
Seca9g02081 1025 SMART LRR_typ_2 179 203 IPR003591 -
Seca9g02081 1025 SMART LRR_typ_2 404 428 IPR003591 -
Seca9g02081 1025 SMART LRR_typ_2 452 476 IPR003591 -
Seca9g02081 1025 SMART LRR_typ_2 525 549 IPR003591 -
Seca9g02081 1025 SMART LRR_typ_2 477 500 IPR003591 -
Seca9g02081 1025 SMART LRR_typ_2 107 131 IPR003591 -
Seca9g02081 1025 SMART LRR_typ_2 573 596 IPR003591 -
Seca9g02081 1025 Gene3D Phosphorylase Kinase; domain 1 677 795 - -
Seca9g02081 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Seca9g02081 1025 Gene3D Transferase(Phosphotransferase) domain 1 796 1022 - -
Seca9g02081 1025 Pfam Leucine rich repeat 551 610 IPR001611 GO:0005515
Seca9g02081 1025 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 796 1024 - -
Seca9g02081 1025 SMART serkin_6 714 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02081 1025 FunFam LRR receptor-like serine/threonine-protein kinase EFR 685 795 - -
Seca9g02081 1025 Pfam Protein kinase domain 716 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02081 1025 Pfam Leucine rich repeat N-terminal domain 43 81 IPR013210 -
Seca9g02081 1025 SUPERFAMILY Protein kinase-like (PK-like) 687 1013 IPR011009 -
Seca9g02081 1025 FunFam LRR receptor-like serine/threonine-protein kinase EFR 344 652 - -
Seca9g02081 1025 Pfam Leucine Rich Repeat 478 495 IPR001611 GO:0005515
Seca9g02081 1025 PANTHER OS04G0122200 PROTEIN 226 1021 - -
Seca9g02081 1025 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Seca9g02081 1025 CDD STKc_IRAK 720 1016 - -
Seca9g02081 1025 FunFam Piriformospora indica-insensitive protein 2 172 270 - -
Seca9g02081 1025 ProSiteProfiles Protein kinase domain profile. 714 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g02081 1025 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 44 153 - -
Seca9g02081 1025 Gene3D Ribonuclease Inhibitor 41 321 IPR032675 -
Seca9g02081 1025 Gene3D Ribonuclease Inhibitor 322 655 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02081 Seca-Chr9 32978113 32981314 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02081 42 1023 Receptor kinase-like Gene Family AT3G47570 46.941 0.0 866
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Seca9g02081 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02081 - - gmx:100785561 1388.63