Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02074 ATGGAGTGCACAAGAACAGGTCAATGGTTAAACCTTCTACTCTGTGTACTTCTATTGCTGAAGGCAGAAGCTTCTTATGTACCAATCACTTATCTCCAGAGTGCAGTAACAAAAGGAGCCGTTTGTTTGGATGGGAGTCCACCAGCTTACCATTTTGATAAGGGATTTGGATCAGGGAATAACAGTTGGTTAGTTCAATTTGAGGGAGGGGGATGGTGCAACAATGTCACTAGTTGCCTTGCTCGCAAGAATGGTCGTTTAGGTTCATCTAAGCAAATGGGCAAGCAAATTGCCTTTTCAGGAATTTTAAATAACCAGAGAATGTTTAATCCAGATTTTTACAATTGGAACAGAATCAAGGTTAGATATTGTGATGGATCATCATTTACTGGTGATGTGGAAGCAGTCAACCCAGTAACCAAGTTACACTTCAGAGGAGCAAGGATTTTTAATGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCGAAATGCTATTATCTCTGGATGTTCAGCTGGAGGATTGACTTCAGTACTGCATTGTGATCGTTTTCGAGCTCTATTACCATCAGGAGCTAAAGTGAAGTGCCTTTCAGATGCTGGTTACTTTATCAATGCAAGGGATGTCTCTGGAGCACTGCACATTGAACAGTACTTCAGTCAAGTTGTTGCCACACATGGCTCTGCAAGGAGTTTGGCTCAATCATGCACTTCAAGACTAAGTCCAGGGCTGTGCTTTTTCCCACAATATTTGGTATCACAAATCACTACACCAATCTTCTTTGTAAATGCGGCATACGACTCATGGCAGATCAAGAACGTTTTGGCACCGGGTGTTGCTGATCCTCATGGCCATTGGCATAACTGCAAGTTAGATATAAACAACTGCTCACCTTATCAACTCGATCTAATGCAAGGCTTCAGGACAGAATTCTTAAGGGCTTTGACTGTGCTGCGCAACTCTCCATCTAAAGGACTTTTTATAGACTCTTGCTATGCTCACTGCCAAACTGAAATGCAGGAGACATGGTTCAGAAGTGACTCTCCAATGCTGGGCAAGACAACAATTGCAAAGGCTGTAGCAGACTGGTTTTATGAAAGAAGGCCCTTCCATCAGATAGATTGTCCTTACCCTTGCAATCCCACTTGTCACAACCGCGTTTTTGAACCCCCACAAGACCACCCAGGAGTATAG 1203 0.4281 MECTRTGQWLNLLLCVLLLLKAEASYVPITYLQSAVTKGAVCLDGSPPAYHFDKGFGSGNNSWLVQFEGGGWCNNVTSCLARKNGRLGSSKQMGKQIAFSGILNNQRMFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGARIFNAVIEDLLAKGMKNARNAIISGCSAGGLTSVLHCDRFRALLPSGAKVKCLSDAGYFINARDVSGALHIEQYFSQVVATHGSARSLAQSCTSRLSPGLCFFPQYLVSQITTPIFFVNAAYDSWQIKNVLAPGVADPHGHWHNCKLDINNCSPYQLDLMQGFRTEFLRALTVLRNSPSKGLFIDSCYAHCQTEMQETWFRSDSPMLGKTTIAKAVADWFYERRPFHQIDCPYPCNPTCHNRVFEPPQDHPGV. 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02074 400 PANTHER NOTUM-RELATED 13 388 IPR004963 GO:0016787
Seca9g02074 400 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02074 Seca-Chr9 32923206 32931491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02074 5 398 Carbohydrate Esterase AT4G19420 59.674 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02074 K19882 - gmx:100818146 735.717