Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02071 ATGGAGTGCAATAAGGATGAGGCTACCAGGGCTAAAGAAATTGCTGAGAGGAAGTTTATTGCAAAGGATACTTTGAGTACAAAGAAGTTTGCTTTGAAAGCCCAAAATTTATTTCCTGCCCTTGAGGGTATTCCTCAAATGATATCAACCCTTGATGTGTATATTTCTGCTGAGAATAAAATAAATGGAGAAGCAGATTGGTATGGTATACTTGGTGTGGACCCCCTCGCCGATGATGATACAGTGAGGAAACAATACAGGAAGCTAGCTCTCATGCTTCACCCTGACAAGAACAAGTCCATTGGAGCTGATGGGGCCTTTAAACTTATTTCAGAGGCATGGAGTTTACTATCAGATAAGGCTAAAAGGGAAGCTTATGATGAGAAGAGAAATGGAAAAGCACGTAAAGGTTCAACTCTATTTGGAGGTTCAGCAAAAACAGGGGCTAATGGCAGTTACAATTTTACTAAGACTGCCCCTTCAAGTGCAAGGACTCCAAAGAACACTACTGCTAAGGAAAACACTTCATCTTCTACACATAAGTCAAAACCTACATTTTGGACTGCTTGCCATAATTGCAAAATGCAGTATGAGTATCTCAGAGTTTATCTTAACCTTGAACTTTTGTGTCCCAACTGCCATCAGATATTTTTGCTGTAG 660 0.4015 MECNKDEATRAKEIAERKFIAKDTLSTKKFALKAQNLFPALEGIPQMISTLDVYISAENKINGEADWYGILGVDPLADDDTVRKQYRKLALMLHPDKNKSIGADGAFKLISEAWSLLSDKAKREAYDEKRNGKARKGSTLFGGSAKTGANGSYNFTKTAPSSARTPKNTTAKENTSSSTHKSKPTFWTACHNCKMQYEYLRVYLNLELLCPNCHQIFLL. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02071 219 MobiDBLite consensus disorder prediction 152 182 - -
Seca9g02071 219 PANTHER BNAC03G44070D PROTEIN 1 218 - -
Seca9g02071 219 Gene3D DnaJ domain 63 183 IPR036869 -
Seca9g02071 219 SMART dnaj_3 65 122 IPR001623 -
Seca9g02071 219 Pfam DnaJ domain 66 127 IPR001623 -
Seca9g02071 219 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Seca9g02071 219 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Seca9g02071 219 CDD DnaJ 66 119 IPR001623 -
Seca9g02071 219 PRINTS DnaJ domain signature 122 141 IPR001623 -
Seca9g02071 219 PRINTS DnaJ domain signature 68 86 IPR001623 -
Seca9g02071 219 PRINTS DnaJ domain signature 86 101 IPR001623 -
Seca9g02071 219 PRINTS DnaJ domain signature 102 122 IPR001623 -
Seca9g02071 219 SUPERFAMILY Chaperone J-domain 58 126 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02071 Seca-Chr9 32860236 32860895 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02071 4 217 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.909 5.99e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02071 - - lja:Lj2g3v0520120.1 379.793