Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02070 ATGTCACACATTCTCAAAGAAGTTGCAGCCCAAGAGTATGGGAAATTTGAAGTCAATTTCAGTAGGAAAAGTGTTGTAAAAGCTGTCAATCCTTTACCAAAGCCATTTTCTATCACTCTCACAAATCTTGATCTGCTTTCAGGCCGTTTTCCTGTTACATACTTGTATTTCTACCGCAGACCAAAACTAGGTAACTTTAATGCTTTTGTTGAGGCTCTTAAGAGCTCTCTAGCACAAATTCTTAATTACTACTACCCCTTTTCTGGCCAAATTGTTCAAAATCCCAAAACTTGTGAACCTGAAATCATTTGTGACAACAATGGTGCTCTAATCATTGAAGCACACTTAAATATCCCACTAAAGAATTTAGATTTTTATAATCTCAATGAAACCCTTCAAGAAAAGATAGTCTCAGTTCAACCAGATTTCCCCTTGCAAATTCAGGTAACAGAATTCACTTGTGGTGGCATTTCTATAGCATTTACTTTTGACCATGCATTAGGTGATGCAAGTTCCTTTGGTAAATTTATTGCCTCATGGTGTGAAATAGCTCAAAATAAGCCACTTTCATGTATACCAGACCACACTAGACACCTTTGTGCACGTTCTCCTCCCAAATATCAACCAACCTTGGACCAAACTTTCATCAAATGCACCATGGAAGAGATACAAAACATGCAAATGAACCGCATCTCACTTAAACGCCTTTATCATATCAATGCATCAAGTATCAACATGCTGCAGAGGCTTGCTTCTGTTAATGGCACTAAGAGAACAAAGATTGAGGCTTTCTCTGCCTATGTATGGAGGATAATGATTGGCACAATTGATGAAAGCCATAAAAAGTGCAAGATGGGTTGGTTGGTGGATGGAAGAGAGAGAATGGGTAGAGGTAAGAATTCCATGTCAAATTACATCGGTAATGTCCTGTCTTTGGCTTTTGCTGAGGCAAGCATTCAAGAATTGAAGGAAGCCTCCTTATCAGACACTGGTAACATAGTGCATGAGGCAATTTCAAAGGTGAGCAATGAGGCTCATTTTTTGGATTTGATTGATTGGGTTGAGAGTCATAGGCCTGGTTTGATGCTAGCAAAGGCAGTATTGGGTCAGGATGGGCCAGCACTGGTGGTGTCCTCAGGACAAAGGTTTCCTGTCTCTGAAGTGGACTTTGGATTTGGGAGTCCTTTGTTAGGGACAGTGTACACTTCCATTGAAGGTGTAGGAGTTGGTTACATGAACCAAAGGCCTAGTGCTAAGGGTGATGGTTCATGGACTGTGTCTGCTATCTTGTGGCCTGAACTGGCAGCTGCACTGAAGGATGACCCAATTTTCCAGCCCATGACTGCTTCTCATCTTCAACTATAG 1365 0.4095 MSHILKEVAAQEYGKFEVNFSRKSVVKAVNPLPKPFSITLTNLDLLSGRFPVTYLYFYRRPKLGNFNAFVEALKSSLAQILNYYYPFSGQIVQNPKTCEPEIICDNNGALIIEAHLNIPLKNLDFYNLNETLQEKIVSVQPDFPLQIQVTEFTCGGISIAFTFDHALGDASSFGKFIASWCEIAQNKPLSCIPDHTRHLCARSPPKYQPTLDQTFIKCTMEEIQNMQMNRISLKRLYHINASSINMLQRLASVNGTKRTKIEAFSAYVWRIMIGTIDESHKKCKMGWLVDGRERMGRGKNSMSNYIGNVLSLAFAEASIQELKEASLSDTGNIVHEAISKVSNEAHFLDLIDWVESHRPGLMLAKAVLGQDGPALVVSSGQRFPVSEVDFGFGSPLLGTVYTSIEGVGVGYMNQRPSAKGDGSWTVSAILWPELAAALKDDPIFQPMTASHLQL. 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02070 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 29 403 - -
Seca9g02070 454 Gene3D - 12 214 IPR023213 -
Seca9g02070 454 Gene3D - 217 440 IPR023213 -
Seca9g02070 454 Pfam Transferase family 17 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02070 Seca-Chr9 32843513 32844877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02070 41 433 Monolignol Biosynthesis Gene Families AT5G48930 25.121 4.16e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02070 - - gmx:100795616 764.992