Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g02065 | ATGATCTTGGTACTTAGTTGGCACCACACCCCACTGCCCAATTTCCACAAGGCCTTGCTTTCCCCTTCTTTTGCAAGAAAAATGAAACAGCCATCCAAACCATGGAGGCCCTTCACATCAAATTGCTGCTCAACTGAGGAACAAACCATCTTTAGAAACTTCAGTAGATGCAAAACCTCACGTTCAGATTTCTCCAAAAACATTGCTCCTTTACCATCATTTAGGAGGCTCTCTTTCTCTGATCTTAGCCGTTCCTCATCCACACGAATCAATGAGGATCTTGCACAGTCTTTTGGTGCTGATTTGTATGATTTTCAGCTGAGTGAGCTGCGTGCCATCACCCAGAATTTTTCAAGCAATTTCTTGCTGGGTGAAGGTGGGTTTGGAACAGTGCATAAGGGTTATATAGATGACAACTTGAGGCTAGGCTTGAAGGCACAACCTGTTGCTGTCAAGCTTTTGGACATTGAAGGCTTACAAGGACACCGTGAATGGCTTGCAGAAGTGATTTTTCTTGGGCAGCTAAGACACCCCAATTTGGTTAAGTTGATTGGGTATTGTTGTGAAGATGAAGAACGACTACTTGTCTACGAATTCATGCCTCGAGGAAGCTTGGAGAATCACTTATTCAGAAGGCTAACATCACTGCCTTGGGGAACAAGATTAAGAATTGCAATAGGTGCTGCTAAAGGCCTTTCCTTCTTGCATGGAGCTGAGAAACCAGTCATTTACAGGGACTTCAAGACCTCCAATGTCTTGCTTGATTCAGACTTCACAGCAAAATTATCAGATTTTGGACTTGCAAAAATGGGGCCAGAGGGATCAAAGTCACACGTTACAACCAGAGTTATGGGCACTTATGGATATGCTGCCCCAGAATACATCTCAACAGGGCACTTGACCACAAAAAGTGATGTCTATAGCTTTGGGGTTGTCCTGCTAGAACTGCTTACAGGAAGGAGAGCAACGGATAAGACAAGACCAAAGGCTGAGCAAAACATTGTGGATTGGTCAAAACCTTACTTGAGTAGCAGTAGGAGGTTAAGGTACATTATGGATCCAAGGCTTGCAGGCCAATATTCTGTGAAGGGTACAAAGGAGATGGCACATTTGGCATTGCAATGCATAAGTTTGAATCCTAAAGATAGGCCAAGAATGCCAACAATTGTTGAAACTCTTGAAAGCCTGCAACAGTTCACAGACATGGCAGTTACCAGTGGACACTGGCCAGCATCAACAAAATCTACTAGAAATGGAGCCTCCAACAATAAGGTGAAAACCAGAGCAAGTGCAAATCACAAGAAACCCTCTCCTCCAGTTCCCAGCAAAAAAACTTAA | 1338 | 0.4372 | MILVLSWHHTPLPNFHKALLSPSFARKMKQPSKPWRPFTSNCCSTEEQTIFRNFSRCKTSRSDFSKNIAPLPSFRRLSFSDLSRSSSTRINEDLAQSFGADLYDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYIDDNLRLGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHLFRRLTSLPWGTRLRIAIGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRATDKTRPKAEQNIVDWSKPYLSSSRRLRYIMDPRLAGQYSVKGTKEMAHLALQCISLNPKDRPRMPTIVETLESLQQFTDMAVTSGHWPASTKSTRNGASNNKVKTRASANHKKPSPPVPSKKT. | 446 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g02065 | 445 | FunFam | Serine/threonine-protein kinase BIK1 | 83 | 199 | - | - | |
Seca9g02065 | 445 | Gene3D | Phosphorylase Kinase; domain 1 | 79 | 199 | - | - | |
Seca9g02065 | 445 | Pfam | Protein tyrosine and serine/threonine kinase | 123 | 393 | IPR001245 | GO:0004672|GO:0006468 | |
Seca9g02065 | 445 | SUPERFAMILY | Protein kinase-like (PK-like) | 99 | 394 | IPR011009 | - | |
Seca9g02065 | 445 | MobiDBLite | consensus disorder prediction | 406 | 427 | - | - | |
Seca9g02065 | 445 | FunFam | Serine/threonine-protein kinase PBS1 | 200 | 408 | - | - | |
Seca9g02065 | 445 | MobiDBLite | consensus disorder prediction | 406 | 445 | - | - | |
Seca9g02065 | 445 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 242 | 254 | IPR008271 | GO:0004672|GO:0006468 | |
Seca9g02065 | 445 | CDD | STKc_IRAK | 123 | 396 | - | - | |
Seca9g02065 | 445 | ProSitePatterns | Protein kinases ATP-binding region signature. | 123 | 152 | IPR017441 | GO:0005524 | |
Seca9g02065 | 445 | ProSiteProfiles | Protein kinase domain profile. | 117 | 400 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca9g02065 | 445 | Gene3D | Transferase(Phosphotransferase) domain 1 | 200 | 409 | - | - | |
Seca9g02065 | 445 | PANTHER | OS01G0588500 PROTEIN-RELATED | 83 | 397 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g02065 | Seca-Chr9 | 32812364 | 32815935 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca9g02065 | 105 | 409 | Glycoside Hydrolase | AT3G07070 | 51.456 | 1.32e-102 | 310 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Seca9g02065 | PK_Tyr_Ser-Thr | 7.2e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g02065 | - | - | lang:109333209 | 752.666 |