Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g02040 | ATGGCAGATGACGATGGTAACAATCCTTTGTCTGACAACGTTGTTGTACTACTCATTGCCATGGGTTCAGCAGCTTTTGTTGTCTCATTGTACCATGTCATAGCCATTTGCTTGTGCCACCAACGCATCACAGATCAAAATCCACCACAACAGCAGCTACCTCAGCTTGCTGGGGCAGAGACACAGAGCAGTTCCTCAGTGGCACACTTGATTCCTACACACAAGTATCACAAGAAAAAACAAAACATGGATGTTGGTGATGGTGATGAAGATGGCATTTGTGCTGTGTGTTTGGGAGATTTTGAGGAAGGTGAGGAATTGAGGACATTGCCTGAATGTATGCACTCTTTCCATGTCCCTTGCATTGATATGTGGCTCTATTCTCATTCAAGCTGCCCTGTTTGCCGTGCCAGTGCCACCCCTTCAGCAGTGCTCCATCAAGACCGTGACTTGAATGCACATCACAGCATAAATATGACACCAGTTGCTTTTCTCCAAACTGGGTTGGCAAGATGGTGA | 519 | 0.4624 | MADDDGNNPLSDNVVVLLIAMGSAAFVVSLYHVIAICLCHQRITDQNPPQQQLPQLAGAETQSSSSVAHLIPTHKYHKKKQNMDVGDGDEDGICAVCLGDFEEGEELRTLPECMHSFHVPCIDMWLYSHSSCPVCRASATPSAVLHQDRDLNAHHSINMTPVAFLQTGLARW. | 173 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g02040 | 172 | SUPERFAMILY | RING/U-box | 93 | 142 | - | - | |
Seca9g02040 | 172 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 11 | 139 | IPR044675 | - | |
Seca9g02040 | 172 | ProSiteProfiles | Zinc finger RING-type profile. | 94 | 136 | IPR001841 | - | |
Seca9g02040 | 172 | Pfam | Ring finger domain | 94 | 136 | IPR001841 | - | |
Seca9g02040 | 172 | CDD | RING-H2_EL5-like | 93 | 136 | - | - | |
Seca9g02040 | 172 | SMART | ring_2 | 94 | 135 | IPR001841 | - | |
Seca9g02040 | 172 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 49 | 142 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g02040 | Seca-Chr9 | 32452829 | 32453347 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca9g02040 | 16 | 148 | C3H Transcription Factor Family | AT5G17600 | 34.247 | 1.49e-20 | 85.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g02040 | - | - | aip:107639941 | 211.075 |