Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02024 ATGGCCGTGAATCTGACACACGGGGCGATCGAGACTATGTGCAGCGACAACTTCTCTTCGGAGGAGTTGCAGCCGGTACTGCAGGTTATCGACTTGAAGTCGCAGCAGAACAGCGCCGTCGAGAGGTACCGCCTTGTGCTCTCTGACGGTTCGTATTATTATCAGCAAGGGATGCTCGCCAGGCAGAAGAACGAGTTGGTCCGTTCTCGAAGTTTGCAGAAAGGTTCCGTTGTTAGGCTCACTCGGTTCATCTGCAACGTTGTCCAGGGCCGCAACAGGATTATTATCATCGTTGACCTAGATGTTTTACTGGACAAATGTGACCTGATTGGAGTACCTGTTGCACTACCAAAAAATACATCTGCGGAATCTGCCACAGGAATAACCTCTGGGAATTCACGGTCTTTAAATGGTAATCCCTCTTAA 426 0.4953 MAVNLTHGAIETMCSDNFSSEELQPVLQVIDLKSQQNSAVERYRLVLSDGSYYYQQGMLARQKNELVRSRSLQKGSVVRLTRFICNVVQGRNRIIIIVDLDVLLDKCDLIGVPVALPKNTSAESATGITSGNSRSLNGNPS. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02024 141 Gene3D - 3 117 IPR012340 -
Seca9g02024 141 MobiDBLite consensus disorder prediction 122 141 - -
Seca9g02024 141 Pfam Replication factor-A protein 1, N-terminal domain 5 103 IPR007199 GO:0003677|GO:0005634|GO:0006260
Seca9g02024 141 SUPERFAMILY Nucleic acid-binding proteins 1 109 IPR012340 -
Seca9g02024 141 FunFam Replication protein A subunit 4 117 - -
Seca9g02024 141 CDD RPA1N 8 103 IPR007199 GO:0003677|GO:0005634|GO:0006260
Seca9g02024 141 PANTHER RPA-RELATED PROTEIN RADX 31 128 IPR040893 GO:0003697
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02024 Seca-Chr9 32328389 32329354 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g02024 1 125 Core DNA Replication Machinery Family AT4G19130 46.512 1.15e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02024 K07466 - gmx:100778597 156.377