Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g02012 ATGGCTGCTACTGAAACCTCTCTCTTGAGGATGGAGCAGATACCTCACAAAGGGAGAGGTCTTGTTGCAGCACAGTCTCTTCAGGCTGGCCAAATAGTCCTCAAAGAATCCCCTCTCATCCTCTACTCTGCTTCCCCTCTCTTCTCTCCACCCTCTTCTTCATCCTTCTCTTATTGTGACCACTGCTTCAGAATCCTACCACCACCACCTACAAACACTGTTCCATGCCCCTCTTGTTCCCACCACCATTTCTGTACCCACAAGTGTCTCTCCACTGCCCTCAATTCCTCCCACTCTTCCTGGGTATGTCAAGCTCTCTCTCTCCTCAGAGACCCCTTTTCACCACTCCTTCAACAACCCCTTGAACGACAAGTCCAAGCTCGTTTCGTTGTTGCTGCTTACAACCTTTCCATTCACTCCCCTTCTGATCTCCACACTTTGCTTTCTCTTCATGGTACCCCTGATGCTCCCATATTTGATGCTGCTCATTTCCTTCATTCTCTTATCTCACCCCTTTTGCCACCCCACAGTCATTTCTCTGTTGAACTAGCTGCCCAACTCATTGCTAAGGATAGACTCAACTCCTTTTGCTTAATGGACCCTTATTCCCCTGATGGGCCTCAGAGAAACATCAAGGCCTATGGTATTTACCCAAAAGCAACGTTTTTCAACCATGATTGTGTTCCCAATGCATGCAGGTTTGATTATGTGGACACTAGTGATCCTGGGGATGAACATAACACTGACATTGTTATCAGGTTGATTCAGGATGTTCCTCCTGGAAGTGAGGTCTGCATAAGCTATTTCAGGATCAATAGGGATTACTCTGCCAGGAAAAGGATCTTGATGGAGGATTATGGGTTCACTTGTGAATGTGATAGGTGTAAGATTGAAGCCAATTGGGCTGATGGTCAATGCCAAGGAGAGATGAGTGACCTGCCACACATGCGTTTCCTTAAGAAGCATGTTTGTGACAGGAAGAATTGTGCAGGCACTATGGCTCCTCTGCCTCCAAAAGATGATGTACCATCTAATGTTCTTGAGTGTAACTTTTGTGGTAATTTCAAAACTCTTACTGCTTAG 1083 0.4617 MAATETSLLRMEQIPHKGRGLVAAQSLQAGQIVLKESPLILYSASPLFSPPSSSSFSYCDHCFRILPPPPTNTVPCPSCSHHHFCTHKCLSTALNSSHSSWVCQALSLLRDPFSPLLQQPLERQVQARFVVAAYNLSIHSPSDLHTLLSLHGTPDAPIFDAAHFLHSLISPLLPPHSHFSVELAAQLIAKDRLNSFCLMDPYSPDGPQRNIKAYGIYPKATFFNHDCVPNACRFDYVDTSDPGDEHNTDIVIRLIQDVPPGSEVCISYFRINRDYSARKRILMEDYGFTCECDRCKIEANWADGQCQGEMSDLPHMRFLKKHVCDRKNCAGTMAPLPPKDDVPSNVLECNFCGNFKTLTA. 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g02012 360 SMART set_7 7 275 IPR001214 GO:0005515
Seca9g02012 360 Gene3D - 58 112 - -
Seca9g02012 360 Gene3D SET domain 20 296 IPR046341 -
Seca9g02012 360 Pfam SET domain 18 268 IPR001214 GO:0005515
Seca9g02012 360 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 307 357 IPR044238 -
Seca9g02012 360 SUPERFAMILY SET domain 9 296 IPR046341 -
Seca9g02012 360 ProSiteProfiles SET domain profile. 7 269 IPR001214 GO:0005515
Seca9g02012 360 CDD SET_SMYD 193 295 - -
Seca9g02012 360 Gene3D - 113 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g02012 Seca-Chr9 32171959 32173041 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Seca9g02012 SET 5.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g02012 - - lang:109349046 495.738