Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01993 ATGGCAGCTAACGTGAACTGCGACATGCCCCTCACTCACCCTCATTGGTACTCTCCTGAAACCGGAATTTACCATAGCATACACGCTCCCTTGGACCTTCCCACTGACCCTTTTCTCGACCTTGTTTCCTTCATTTTTTCTCACAGCCACAATGGGGTTTCCGCCCTTGTTGATTCCTCATCTGGGTGTTCCATTTCTTACTCAAAGTTGTTACCTTTGGTCAAATCCATGGCTTCTGGTCTCCACAGTATGGGTGTTTCACAAGGTGACGTCGTTTTGCTTTTACTTCCCAATTCCATTTACTATCCCATTGTCTTCTTGGGTGTTCTGTATCTAGGTGCTGTTGTTACACCATTGAATCCTCTCAGTAGTATCTATGAAATACGTAAGCAGATTACTGAATGTGGTGTGAGTTTGGCTTTTACTGTACCTGAAAATGTCAAGAAACTAGAACCATTGGGCATTCCTATTATTGCTGTGCCAGAAAATGAGAAGGGTTTGAAGGATGCTTGTTTCTCAGGGTTTTGTAACCTGATTTCTGGTAAATTTGATTTGCCTCAAAGGCCAGTTATTAAACAGGAAGACACTGCAGGTATACTGTATTCTTCAGGGACTACAGGGGTGAGCAAAGGAGTTGTTCTAACCCATAAAAATCTTATAGCTATGGTTGAGCTTTTTGTGAGATTTGAAGCTTCTCAATATGAATATTCTTGCTTGAAGAATGTGTTTCTAGCTGTTCTGCCAATGTTCCATATATATGGTTTATCACTCTTTGCCATGGGATTGCTGTCTCTGGGTTCCACAGTCATTGTAATGAGGAAATTTGACATTGATGAGGTTATCACGGTGATTGATAAATATAAAGTTACACACTTTCCTGTTGTTCCACCAATGTTGACAGCATTGACAACAAGGGCAAAGTGTATTAATGGAAGTAAGTTGAAGAGTTTGATACAGGTCTCCTGTGGTGCTGCACCTTTGAGTGCAGGAGTAATTAATGACTTTGTCCAAACTTTCCCTAACATTGATTTTATACAGGGTTATGGAATGACTGAGTCAACTGCAGTAGGAACACGTGGATTCAATACTGAAAAGTCTTGCAAATACTCTTCAATAGGGTTGTTAGCTCCAAACATGGAGGCAAAAGTGGCAGACTGGAATAGTGGTGCATTTTTGCCCCCGGGCAGCAGTGGTGAGCTTTGGTTGAGAGGGGCTTCAATTATGAGAGGATACTTGAATAATGAGGAAGCCACAATGTCAACAATTGATAAAGACGGTTGGCTACATACTGGAGATGTTGTTTATTTTGATCAGGATGGATATTTACATATATCTGACCGCTTGAAAGATATTATCAAATACAAGGGATTTCAGGTTTCTATTTTTTGGTTCTGA 1395 0.4079 MAANVNCDMPLTHPHWYSPETGIYHSIHAPLDLPTDPFLDLVSFIFSHSHNGVSALVDSSSGCSISYSKLLPLVKSMASGLHSMGVSQGDVVLLLLPNSIYYPIVFLGVLYLGAVVTPLNPLSSIYEIRKQITECGVSLAFTVPENVKKLEPLGIPIIAVPENEKGLKDACFSGFCNLISGKFDLPQRPVIKQEDTAGILYSSGTTGVSKGVVLTHKNLIAMVELFVRFEASQYEYSCLKNVFLAVLPMFHIYGLSLFAMGLLSLGSTVIVMRKFDIDEVITVIDKYKVTHFPVVPPMLTALTTRAKCINGSKLKSLIQVSCGAAPLSAGVINDFVQTFPNIDFIQGYGMTESTAVGTRGFNTEKSCKYSSIGLLAPNMEAKVADWNSGAFLPPGSSGELWLRGASIMRGYLNNEEATMSTIDKDGWLHTGDVVYFDQDGYLHISDRLKDIIKYKGFQVSIFWF. 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01993 464 Pfam AMP-binding enzyme 52 454 IPR000873 -
Seca9g01993 464 Gene3D - 23 450 IPR042099 -
Seca9g01993 464 FunFam Long-chain-fatty-acid--CoA ligase FadD 28 449 - -
Seca9g01993 464 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Seca9g01993 464 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 18 460 - -
Seca9g01993 464 SUPERFAMILY Acetyl-CoA synthetase-like 50 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01993 Seca-Chr9 31942110 31946246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01993 14 460 Monolignol Biosynthesis Gene Families AT4G19010 60.134 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01993 K01904 - gmx:100804808 795.808