Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01967 ATGGGGCGTCTGGGAAGCGGTTTTGTGAATCAGGTGCGAGTTCCTGAGTGCCTAGGAATATGGCTCTTGAATTCTGATTTGGATCTCAACAAGCGTCTAAACCTTCCTTTGGGATTGAATGTAACTGATTCGAACTCAGATGTCACGTGGATACGTTTGAGCAGAGGAGAAGGAGTTGTGCCAGGGTGGGTGCAGGGCAAACAGTTGGCATACGAATTTGGAAGTGAAATCAACATAAGTGGTAAATTCCTGTTATCTGAGATTATTTTTCTTCATAGTAAGGGATTGCAGGAGATGAGTGTGTGGTCAGATGAACGTGAAGATGAAGAAGAAGAAGAAGAGCGGGACAATAATGGGGACGAAGATGATGAAGACAGAGATGAAGAGAGTGGTGAAGATGATGCCTCTGAATCTGAGGTTGCAGTTGAAGGTATCAGTATAAATGATGTGGATGATATCCGTAAGATAGATTTGGTAAATATTAGTTGGGAGGAGGTGGGCAGGTGTGTATTTTCTGACTTGGATGTTGCATATCAATTCTACTGTAAATATGCAAGAAGAAAGGGTTTTGCTGTCCGAAAAGGAAATGTGGTAAAGAATAGTAAAAGGGAAATTGTACAGCAAACACTATTTTGCAACATGCAAGGGAAAAGAATAAGCTCAGGTCCAAAAAAGCGCGAAGCAAAACCAGAAACTAGATGTGAATGCCTTGCAATGTTTTGTGTTCGAAAAGAGTTATTGAGTGGGGGATGGTATGTGAAAATCTTTAATGATGATCACAATCATGGCATGCTTGAAAACAAGTATTGTGGGATGATGGCAGCTCACCGGAAAATGACTGAGTCTGACATAATGGAAATGAACAGTATGAGAAGTGTTGGGATATCTGTTCCTGATATATATGCCTCTTTTGCTAGTCGGTCTGGAGGCTATGACAAGGTTGGGTTCCGCATAAAGGATATGTACAATCAAATTGACAAACAACGGCGGTTTCAAAGGTCTGATGCAAAAACTGTGCTAAGGTACCTACGTGAAATGCGAAAGCATGACCCACTAATGTCTTTCACACACACTGTTGATGAAGAAAGTAGGCTACAACATCTTTTTTGGTCTGATGGTATTAGTAAGTTAAATTATGAACTTTTTGGTGATGTGCTAGCGTTTGATGCCACTAACGGGAGGAATAAATATAAGCATCCCCTAGTTATATTTTCCGGGGTCAATCATCACAACCGTACAACTGTCTTTGGCAGTGATATTGTATCTAATGAGACAGAAGACACATATGTTTGGCTACTCCAACAATTTAAAGATGCAATGAAAAGGAAGTCACCGAAGGCAGTTATCATAGATGGTGATATGGCTATGAGGAATGCCATAAAAAGAGTGTTTCCAGGGGCACATCACCGACTATGTTCATGGCATTTGCTTCGGAATGCAACTTCAAATGTTGGAATCCCTGCATTTCTTGAAGAGCTAGAAAGGTGTATGTTTGCTCATGTTGAAGTTGCTGAATTTTCCCGTCGGTGGAGAGACATGGTTTGTAAGTATAATTTAGAGGATAATAATTGGGTTAAAGATTTGTATGAGAAGAAGCATATGTGGGCCACAACATATATAACAGGTCAATTTTTTGCGGGGTTACGGACAACTTCTCGATGTGAGAGTTTGCATGGTCAACTTGGAAGGTTTGTAAAATCGTGGTATAGCCTAACTGAATTTGTTCAACACTTCCAGCGGTCCCTTTGTTACATGAGGTATAAAGAAGAGGAGGATAATTTTGCATCTATGTTGAGTGATGTTGTGTTAACAACAAACTTGCAGCCGTTGGAACGGTCGGCATGA 1845 0.407 MGRLGSGFVNQVRVPECLGIWLLNSDLDLNKRLNLPLGLNVTDSNSDVTWIRLSRGEGVVPGWVQGKQLAYEFGSEINISGKFLLSEIIFLHSKGLQEMSVWSDEREDEEEEEERDNNGDEDDEDRDEESGEDDASESEVAVEGISINDVDDIRKIDLVNISWEEVGRCVFSDLDVAYQFYCKYARRKGFAVRKGNVVKNSKREIVQQTLFCNMQGKRISSGPKKREAKPETRCECLAMFCVRKELLSGGWYVKIFNDDHNHGMLENKYCGMMAAHRKMTESDIMEMNSMRSVGISVPDIYASFASRSGGYDKVGFRIKDMYNQIDKQRRFQRSDAKTVLRYLREMRKHDPLMSFTHTVDEESRLQHLFWSDGISKLNYELFGDVLAFDATNGRNKYKHPLVIFSGVNHHNRTTVFGSDIVSNETEDTYVWLLQQFKDAMKRKSPKAVIIDGDMAMRNAIKRVFPGAHHRLCSWHLLRNATSNVGIPAFLEELERCMFAHVEVAEFSRRWRDMVCKYNLEDNNWVKDLYEKKHMWATTYITGQFFAGLRTTSRCESLHGQLGRFVKSWYSLTEFVQHFQRSLCYMRYKEEEDNFASMLSDVVLTTNLQPLERSA. 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01967 614 MobiDBLite consensus disorder prediction 101 141 - -
Seca9g01967 614 MobiDBLite consensus disorder prediction 103 139 - -
Seca9g01967 614 Pfam FAR1 DNA-binding domain 179 265 IPR004330 -
Seca9g01967 614 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 170 612 IPR031052 GO:0006355
Seca9g01967 614 Pfam MULE transposase domain 385 479 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01967 Seca-Chr9 31607801 31611715 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g01967 MULE 3.9e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01967 - - tpra:123913749 526.939