Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01953 ATGGCAACAACAGACGGAGAGGGAGGAGAAGGAGAAGAACGAGAACGAGAACGAGAACGAGAAGCTGCACGGCTCAAGGCTCTAGCAGAGGCCAAGTACAAAAGCTCCAAAAACCCCAAAACAGCTCTGAAATACGCGAAGCGAGCCCAGCGTCTTGCCCCTGAGCTTGATGGCATATCAGAGACTGTGACCTCCCTCTCCATTCTCTGCGCCCCCGATTGGTACTGTGTTCTCGATGTGGAGCCCTTCGCAAACGCCAACGCTATTCGGAAACAGTACAAGAAGCTCGCCTTGCTCCTTCATCCCGACAAGAACCCACACGTGGCCTCCGAAGAAGCTTTCAAGCTCCTTGGCGAGGCTTTCCGTGTTCTCTCTGATAGGTCCCTCAAGAAGGACTACGATGCCAACCTCCGCCTCAGGCGTGAAGAAGAGACCCGAACTTTCTGGACCGCGTGTTCCACTTGCAGGCTCTTGCACCAGTTCGAGAGGAGGTACGTTGGTCATAACCTTGTGTGTCCTAGTTGTAATAAGAGTTTTAAGGCTGTGGAAGCTGTTCAGAGTGATGGGTCTTTGGATGAGGGAGAGGAGAATGGGGGTGGGTCGTTGGGGGACATTGTGTTGAGGAAGAAGGAGAAGGGAAAGAAGAAGATGGGTGTTGTTGAGGAATCGAAGGGGGTGAAAGGGAAAGTGGGTGGTGAAAAAGGTGGGAACTTGAAGGGTAAAGTTGGAGATGATGAAGTGGGAAGTGGTCGAAGATTGAGGAAGAGAATGCGTACTGTTGGAGAGCTGTTGGAGAGGTCAAAACCTAAGAGGATTGGAACCGGGGAGGAAATGATGACATTGGCTGAATTTCAGTCTAAAGTGAAGAGAAAGGCACAGCAAGAGAAGATGAAGGATAAGGAGGATGAGGAGGAAGGGGGCAGAACACAGAAGAGGAGATTGAAGAAGAGTGTGGAAAATAAGAAGGGTTTAGAGGTTGGGGAGGTTAGGAGTTTGAAGAAGAGTGAGAAGCCTGCAATCAAGGAGAAGCATGAGGATTCTGTGAAGAGAAAGGGGTTGAGACTTGAGAAGCACAGGGATTCTAGTGGAGGGGAATTGGAAGTCATGGCAGTGGTGGATTCAGATTTTTATGATTTTGACAAAGATAGAGTGGAGAGGAGCTTCAAGAAAGGCCAAGTGTGGGCAGTGTATGATGATGATGATGGAATGCCCAGGCATTATGCCTTGATTGATGAAACCGTTTCAGCAAACCCTTTTGAAGTGAGAATAAGTTGGTTGGATCTACAGAACAATGGGGATGGAAAGATAGTCAATAGGGAGAAAATGGGGTTTCACATACCCTGTGGGAGGTTTAAAGTTACCAGGAAGGCTTCCATAAATTCACTAAATATCTTTTCCCATGTTGTAGATTGTGACCGGGTAGCATGTGAGGTTTACATAATTTATCCCAAGAAGGGTTCGGTATGGGCACTTTATAGTGAGGCAACTCTTGATGCAGATGGAAGACATTTTGCTGATGAGAGCAAGAGATGCTATGACATTGTTGTATTTTTGTCAAGTTACAGTGAGATGAATGGTCTGAGCATGGCATATCTTGAGAAGGTTGATGGTTATAAGACAGTATTTAAGAGACAAGAGATGGGGAGTCATGCCATTAGATTTCTAGGAAAGGATGACATGTGGTTGATTTCTCATCAGATTCCTGCACGGAAACTCCCTTGTAAGGATACTCCTGAACTGTTGAAAGATTGTTGGGAACTTGATCCTGCTTCACTTCCTTCAGATTTACTTACTATTGGTGGCATAGATAATTGA 1815 0.4661 MATTDGEGGEGEEREREREREAARLKALAEAKYKSSKNPKTALKYAKRAQRLAPELDGISETVTSLSILCAPDWYCVLDVEPFANANAIRKQYKKLALLLHPDKNPHVASEEAFKLLGEAFRVLSDRSLKKDYDANLRLRREEETRTFWTACSTCRLLHQFERRYVGHNLVCPSCNKSFKAVEAVQSDGSLDEGEENGGGSLGDIVLRKKEKGKKKMGVVEESKGVKGKVGGEKGGNLKGKVGDDEVGSGRRLRKRMRTVGELLERSKPKRIGTGEEMMTLAEFQSKVKRKAQQEKMKDKEDEEEGGRTQKRRLKKSVENKKGLEVGEVRSLKKSEKPAIKEKHEDSVKRKGLRLEKHRDSSGGELEVMAVVDSDFYDFDKDRVERSFKKGQVWAVYDDDDGMPRHYALIDETVSANPFEVRISWLDLQNNGDGKIVNREKMGFHIPCGRFKVTRKASINSLNIFSHVVDCDRVACEVYIIYPKKGSVWALYSEATLDADGRHFADESKRCYDIVVFLSSYSEMNGLSMAYLEKVDGYKTVFKRQEMGSHAIRFLGKDDMWLISHQIPARKLPCKDTPELLKDCWELDPASLPSDLLTIGGIDN. 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01953 604 MobiDBLite consensus disorder prediction 284 348 - -
Seca9g01953 604 PANTHER BNAC03G44070D PROTEIN 19 593 - -
Seca9g01953 604 CDD DnaJ 73 126 IPR001623 -
Seca9g01953 604 SUPERFAMILY Chaperone J-domain 68 137 IPR036869 -
Seca9g01953 604 PRINTS DnaJ domain signature 109 129 IPR001623 -
Seca9g01953 604 PRINTS DnaJ domain signature 75 93 IPR001623 -
Seca9g01953 604 PRINTS DnaJ domain signature 93 108 IPR001623 -
Seca9g01953 604 Pfam Domain of unknown function (DUF3444) 368 572 IPR024593 -
Seca9g01953 604 MobiDBLite consensus disorder prediction 288 348 - -
Seca9g01953 604 Pfam DnaJ domain 73 134 IPR001623 -
Seca9g01953 604 SMART dnaj_3 72 129 IPR001623 -
Seca9g01953 604 MobiDBLite consensus disorder prediction 7 23 - -
Seca9g01953 604 Gene3D DnaJ domain 69 155 IPR036869 -
Seca9g01953 604 ProSiteProfiles dnaJ domain profile. 73 137 IPR001623 -
Seca9g01953 604 MobiDBLite consensus disorder prediction 1 23 - -
Seca9g01953 604 MobiDBLite consensus disorder prediction 221 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01953 Seca-Chr9 31503867 31505681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01953 2 186 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.233 1.78e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01953 - - lja:Lj2g3v1510610.1 808.905