Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01896 ATGGGAGATGTGGCTAAGGACCTTACAGCTGGGACTGTTGGAGGGGCAGCACAATTGATAGTTGGACACCCATTTGACACCATCAAGGTCAAACTCCAAAGCCAGCCCACACCACTTCCTGGCCAGCTTCCCAAGTATTCTGGTGCAATTGATGCAGTTAAGAAGACAATAGAAGCTGAAGGCCCAAGGGGTTTATACAAAGGTATGGGAGCCCCACTTGCTACAGTAGCTGCCTTCAATGCTGTCCTGTTTACAGTCAGGGGGCAAATGGAGGGATTATTGAGGTCCCATCCTGGTGCCTCTCTCACAGTACAGCAGCAGGTTGTTTGTGGAGCTGGAGCTGGACTTGCTGTTTCCTTTCTAGCCTGCCCCACTGAACTGATCAAATGCAGGTTGCAAGCACAAAGTGCACTAGCTGGTTCTGGAGGAGCTGCAGTGGCAGTGAAATATGGGGGACCCATGGATGTGGCCAGGCACGTTCTCAGGTCAGAAGGGGGAACTATAGGTCTTTTCAAGGGCTTGGTTCCTACTATGGCACGTGAAGTACCTGGGAATGCTGCAATGTTTGGTGTATATGAAGCATTCAAGCAATTACTTGCAGGAGGCACAGATACCTCTGGACTAGGTAGAGGTTCTCTGATGTTTGCTGGAGGCATGGCTGGAGCTGCCTTTTGGTTAATGGTTTACCCAACTGATGTTATTAAGAGTGTGATTCAAGTAGATGATTACAAAAATCCAAAGTTTTCTGGTTCAATTGATGCTTTCAAAAGGATTCTAGCTTCTGAGGGGACCAAGGGCCTTTATAAGGGTTTTGGTCCTGCAATGGCACGAAGTGTTCCTGCAAATGCAGCATGCTTCTTGGCATATGAGATGACAAGATCAGCTCTTGGATGA 894 0.4821 MGDVAKDLTAGTVGGAAQLIVGHPFDTIKVKLQSQPTPLPGQLPKYSGAIDAVKKTIEAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMEGLLRSHPGASLTVQQQVVCGAGAGLAVSFLACPTELIKCRLQAQSALAGSGGAAVAVKYGGPMDVARHVLRSEGGTIGLFKGLVPTMAREVPGNAAMFGVYEAFKQLLAGGTDTSGLGRGSLMFAGGMAGAAFWLMVYPTDVIKSVIQVDDYKNPKFSGSIDAFKRILASEGTKGLYKGFGPAMARSVPANAACFLAYEMTRSALG. 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01896 297 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 296 - -
Seca9g01896 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Seca9g01896 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Seca9g01896 297 Pfam Mitochondrial carrier protein 102 200 IPR018108 -
Seca9g01896 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 296 - -
Seca9g01896 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Seca9g01896 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Seca9g01896 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Seca9g01896 297 Gene3D Mitochondrial carrier domain 2 296 IPR023395 -
Seca9g01896 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01896 Seca-Chr9 30671808 30677568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01896 22 296 Antiporters AT1G79900 31.673 6.25e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01896 K15109 - gmx:100781634 513.072