Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01890 ATGCTCGGCATCTATTACGACCACATCGAAGCCAGGGTATTGTACCAGGACGCCAGGTTCGACTCCGAATTCGTGGACCCTTTCTATCAGGGCCACAAGAACACCACATTTTTTACCACTGAGTTTAAGGGTCAACACGTCATGACGCTTGATGCTGACCAGTCTTCCGAACTTAGCAAGGAGAATGGCTCAGGGGTTTACGGAATCGATGTGAAGCTTTATCTGAGGGTGAGGTTCAGGTTGGGAGCCCTCAAGATGAAGACGTTGAAGCCCAAACTGGTCGGAGAGGACATGGCGAAGGGAAAGCTTCGTCTGGTTTTGGAGAGGACATGGAAGGGTTTTCATTTTATACATTTTATAGAATTATTTTGCATGTATATCAACTAG 387 0.4677 MLGIYYDHIEARVLYQDARFDSEFVDPFYQGHKNTTFFTTEFKGQHVMTLDADQSSELSKENGSGVYGIDVKLYLRVRFRLGALKMKTLKPKLVGEDMAKGKLRLVLERTWKGFHFIHFIELFCMYIN. 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01890 128 PANTHER OS05G0367900 PROTEIN 3 86 IPR044839 GO:0098542
Seca9g01890 128 Pfam Late embryogenesis abundant protein 3 87 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01890 Seca-Chr9 30597701 30598087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01890 2 91 SNARE and Associated Proteins AT1G32270 34.444 1.52e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01890 - - gmx:100806641 132.88