Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01866 ATGGCAACACAATATGAAGTTGAGCATCCTAAGAAGGCCTTCGGATGGGCAGCAAGAGATACTTCTGGTTTTCTCTCCCCTTTCAATTTCTCCAGAAGGGAAACGGGTGAGAAAGATGTGGCATTCAAAGTGTTGTACTGTGGGATATGCCACTCAGATCTCCACATGCTCAAGAATGAATGGGGCGCTTCAACCTATCCACTAGTCCCTGGGCATGAAATTGTCGGTGTAGTGACAGAGGTGGGAAGCAAAGTACAGAAATTCAAAGTTGGGGACAAAGTGGGTGTGGGATACATTGTTAATTCCTGCCGCTCATGCCAAAACTGCGTCGACAGTCTTGAGAATTACTGTCCACGTAATACTCCCACATCTGGTGCCAAATATATTGATGGCACCCCCACATACGGAGGCTACTCTGACTCAATGGTAGCAGATGAAAACTTTGTGGTTGGCATTCCTGATACCTTACCTCTTGATGCTGCTGCACCTCTCCTCTGTGCTGGAATCACAGTGTATAGCCCTCTCAGATATTATGGACTTGACAAGCCAGGCCTGCATGTGGGTGTGGTTGGTCTCGGTGGATTAGGCCATATGGCTGTCAAGTTTGCCAAAGCTTTTGGTGCTAATGTGACAGTTATCAGCACATCACCCAACAAACAGAAGGAAGCAATAGAACACCTTGGAGCTGACTCATTTCTAATAAGCCGTGACAATGATCAGATGCAGGCTGCAATGGGCACTCTGGATGGTATTATTGACACAGTTTCTGCTAATCATCCTCTGTTACCTCTGCTGGGTTTACTCAAGTCTCATGGAAAGCTTGTAATGGTGGGTGCACCAGATAAGCCTATGGAGTTGCCGGTCTTTCCCTTACTTTTAGGGAGAAAGATAGTAGCTGGCAGTAGTGTTGGAGGGATGAAGGAGACACAAGAGATGGTTGACTTTGCAGCAGAACACAATGTAAAACCTGACATTGAGGTCGTTCCTATTGATTATGTCAACACAGCATTGGAGCGCCTTGTTAAAGCTGATGTGAAATATCGGGAAACGGGGGAGAAAGATGTTGCATTTAAAGTGTTATACTGTGGAATATGCCACTCTGATCTCCACATGCTCAAGAATGAATGGGGCATGTCTATTTATCCACTTGTCCCTGGGCATGAGATTGTTGGCATAGTAACAGAGGTGGGAAGCAAGGTACAAAAGTTCAAAGTTGGGGACAGAGTGGGTGTGGGATGCATGGTTGATTCCTGCCGCTCATGCCAAAATTGTGCTGAAAATCTTGAGAATTACTGCCCACGTTATACTCTCACATATAGTGCTAAATATGTTGATGGGACCACCACATACGGAGGCTACTCTGACTCAATGGTAACAGATGAAAACTTTGTGGTTGGCATTCCTGATGGTTTACCTCTTGATGCTGCTGCACCTCTCCTATGTGCTGGAATCACAGTATATAGCCCTCTTAGATATTTTGGACTTGACAAGCCTGGTTTGCATGTGGGTGTTGTTGGTCTCGGTGGATTAGGCCATATGGCTGTCAAATTTGCCAAAGCTTTTGGGGCAAATGTGACAGTTATCAGTACATCACCCAACAAACAAAAGGAAGCAATAGAACACCTTGGAGCTGACTCATTTCTAATAAGCCGTGACAATGATCAGATGCAGGCTGCAATGGGTACTTTTGATGGTATTATTGACACGGTTTCTGCTGATCATCCTCTGTTACCTCTGATTGGTTTATTGAAGTCTCATGGAAAGCTTGTAATGGTGGGCGCACCAGAGAAGCCACTGGAGTTGCCAGTCTTTCCTTTACTACTGGGGAGAAAGATGGTAGCTGGGAGTAGCATTGGGGGGATGAAGGAGACACAAGAGATGATTGATTTTGCAGCAAAACATAATGTAAAACCTGACATTGAAGTCATTCCAATTGATTATGTCAACACAGCAATGGAGCGTCTCCTTAAAGCGGATGTCAAATACCGATTTGTGATTGACATTGGGAACACACTGAAACCAAGCTCTTAG 2031 0.451 MATQYEVEHPKKAFGWAARDTSGFLSPFNFSRRETGEKDVAFKVLYCGICHSDLHMLKNEWGASTYPLVPGHEIVGVVTEVGSKVQKFKVGDKVGVGYIVNSCRSCQNCVDSLENYCPRNTPTSGAKYIDGTPTYGGYSDSMVADENFVVGIPDTLPLDAAAPLLCAGITVYSPLRYYGLDKPGLHVGVVGLGGLGHMAVKFAKAFGANVTVISTSPNKQKEAIEHLGADSFLISRDNDQMQAAMGTLDGIIDTVSANHPLLPLLGLLKSHGKLVMVGAPDKPMELPVFPLLLGRKIVAGSSVGGMKETQEMVDFAAEHNVKPDIEVVPIDYVNTALERLVKADVKYRETGEKDVAFKVLYCGICHSDLHMLKNEWGMSIYPLVPGHEIVGIVTEVGSKVQKFKVGDRVGVGCMVDSCRSCQNCAENLENYCPRYTLTYSAKYVDGTTTYGGYSDSMVTDENFVVGIPDGLPLDAAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHMAVKFAKAFGANVTVISTSPNKQKEAIEHLGADSFLISRDNDQMQAAMGTFDGIIDTVSADHPLLPLIGLLKSHGKLVMVGAPEKPLELPVFPLLLGRKMVAGSSIGGMKETQEMIDFAAKHNVKPDIEVIPIDYVNTAMERLLKADVKYRFVIDIGNTLKPSS. 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01866 676 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Seca9g01866 676 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Seca9g01866 676 SUPERFAMILY GroES-like 21 184 IPR011032 -
Seca9g01866 676 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Seca9g01866 676 FunFam Putative cinnamyl alcohol dehydrogenase 6 639 668 - -
Seca9g01866 676 FunFam Cinnamyl alcohol dehydrogenase 482 638 - -
Seca9g01866 676 Pfam Zinc-binding dehydrogenase 509 632 IPR013149 -
Seca9g01866 676 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Seca9g01866 676 PANTHER ALDEHYDE REDUCTASE 6 348 IPR047109 GO:0016616
Seca9g01866 676 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 471 637 IPR036291 -
Seca9g01866 676 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 386 400 IPR002328 GO:0008270|GO:0016491
Seca9g01866 676 SMART PKS_ER_names_mod 335 666 IPR020843 GO:0016491
Seca9g01866 676 CDD CAD1 340 667 IPR047109 GO:0016616
Seca9g01866 676 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Seca9g01866 676 Pfam Alcohol dehydrogenase GroES-like domain 353 465 IPR013154 -
Seca9g01866 676 SUPERFAMILY GroES-like 337 499 IPR011032 -
Seca9g01866 676 CDD CAD1 14 348 IPR047109 GO:0016616
Seca9g01866 676 Gene3D - 167 323 - -
Seca9g01866 676 Gene3D - 482 638 - -
Seca9g01866 676 Gene3D - 349 668 - -
Seca9g01866 676 Gene3D - 16 348 - -
Seca9g01866 676 FunFam Uncharacterized protein 16 166 - -
Seca9g01866 676 FunFam Uncharacterized protein 336 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01866 Seca-Chr9 30181565 30190268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01866 348 675 Monolignol Biosynthesis Gene Families AT4G37990 74.390 2.46e-162 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01866 K23232 - tpra:123922700 1064.68