Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01864 ATGTCGAAGGTCTCAGTTGGAGAAGAAAACAAAATAGTTGCTTCCTATGGGTGGGCAGCTAGAGACAACTCGGGAATTCTCTCCCCATTCCACTTTACTAGAAGAGCAAATGGTGATAACGATATCACCATCGACATACTCTATTCTGGGATTTGCCACTCGGACCTTCACATGGTGAAGAACGAGTTTGGATTGTCCATCTATCCAATGGTTCCTGGGCATGAGATTGTGGGTAAAGTGACAAAGGTGGGTCGCAAAGTCACAAAACTCAATGTTGGTGACATAGCTGGCGTGGGTGGCGTTGTGGGTTCGTGTGGCTCATGTTCTGACTGCACCAAGGGCTTCTATGTATATTGCCCAAAAATGATTTTAACATATAGTGCGCGCTACCATGATGGATCAATAACCCAAGGTGGATACTCAGATAAGCTAGTGGTTGACCAGAACTTTGCGGTGCTAGTCCCAAAATCTCTGCCACTAGATGGTGCAGCCCCTTTGCTATGTGCTGGAATCACAGTATACAGCCCAATGAAATATTTTGGGCTTGCTCAGCCTGGATTACATTTGGGTGTGGCGGGCCTGGGAGGCCTGGGCCATGTTGCTGTCAAGTTTGCTAAGGCCTTTGGTATGCAGGTCACTGTGATAAGTACTTCCCTTACCAAGAAAAAGGAAGCATTGGAGAGGCTTGGTGCTGATGCATTCTTGGTTAGTCAAGACCAACAACAGTTGCAGGATGCTATGGGCACAATGGATGCCATTATTGACACAGTTTCAGCTCACCACTCCATCCAATCATTAATTGGCTTATTGAAAACAAGTGGAAAATTGATTTTGGTGGGTGCTCCAGCCTTGCCTCTTGAGGTATTAGCTATGCCTTTGCTTTTGGGGAGGAAGATGATTGCTGGTAGTGGAGGAGGGGGGATGGAAGAGATGCAAGAGATGATGGAATTTGCAGCAAGTCACAATATCACGGCAGATGTGGAGGTTATTCCAATGGAATGTGTGAACACAGCATTGGAGAGAGTTAAAAACAACGATGTTAAGTATCGCTTTGTCATTGATGTTGCCAATACAGTAAACTGCATGTCCAATTAG 1095 0.4566 MSKVSVGEENKIVASYGWAARDNSGILSPFHFTRRANGDNDITIDILYSGICHSDLHMVKNEFGLSIYPMVPGHEIVGKVTKVGRKVTKLNVGDIAGVGGVVGSCGSCSDCTKGFYVYCPKMILTYSARYHDGSITQGGYSDKLVVDQNFAVLVPKSLPLDGAAPLLCAGITVYSPMKYFGLAQPGLHLGVAGLGGLGHVAVKFAKAFGMQVTVISTSLTKKKEALERLGADAFLVSQDQQQLQDAMGTMDAIIDTVSAHHSIQSLIGLLKTSGKLILVGAPALPLEVLAMPLLLGRKMIAGSGGGGMEEMQEMMEFAASHNITADVEVIPMECVNTALERVKNNDVKYRFVIDVANTVNCMSN. 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01864 364 Pfam Alcohol dehydrogenase GroES-like domain 40 152 IPR013154 -
Seca9g01864 364 PANTHER ALDEHYDE REDUCTASE 11 358 IPR047109 GO:0016616
Seca9g01864 364 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Seca9g01864 364 SMART PKS_ER_names_mod 25 353 IPR020843 GO:0016491
Seca9g01864 364 Gene3D - 18 355 - -
Seca9g01864 364 FunFam Cinnamyl alcohol dehydrogenase 169 325 - -
Seca9g01864 364 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
Seca9g01864 364 SUPERFAMILY GroES-like 22 186 IPR011032 -
Seca9g01864 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 323 IPR036291 -
Seca9g01864 364 CDD CAD1 17 354 IPR047109 GO:0016616
Seca9g01864 364 Gene3D - 169 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01864 Seca-Chr9 30176871 30178786 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01864 15 364 Monolignol Biosynthesis Gene Families AT4G37990 63.143 2.09e-152 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01864 K23232 - gmx:100801089 561.607