Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01821 ATGGCTGAGAGCTTAGACAGTGCCACCTCTAACCTTCTCTGTTCCGAGAACAGTAGTACCTGCTTTGATGATGATTTGGAATGTAATGGTTTAGATGGGTCTGGAACCTCTCCTTCCTGGGACCACACAAACCTTAACTCTGATCAGTGTCCGAGTTTGGGCAGCCATGGATCGGAGTCCTTTACGTGTTTTATGGTACAGAGTGAGGAAACTGTGAGGGTTATGGTTAAGAGGGAGAGGGAGCATTTGCCAAGGGATGATTACCTCAAGAGGCTGCGTAGTGGGGACTTGGACTTGAGTGTTAGGAGGGAGGCTCTTGATTGGATTTGGAAGGCACATGCTTATTTTGGTTTTGGACCATTGAGCTTTTGTCTATCTGTAAACTACCTGGATCGCTTCCTATCGGTTTTTGAATTACCTAGAGGGGTAAGTTGGACTGTGCAATTATTAGCTGTAGCTTGCTTGTCAATTGCTGCTAAAATGGAAGAGATTAAAGTGCCTCAATCTGTAGATTTACAGGTTGGAGAACCAAAGTTTGTATTTGAAGCTAAAACCATTCAGAAAATGGAACTACTAGTATTGAGCACATTGAGATGGAAAATGCAAGCTTTAACGCCTTGTTCCTTCATAGACTACTTCCTTGGTAAGATCACTTGTGAGAAACATCCAGTAAAGTCATCCATTTCAAGATCAGTGCAACTCATCCTTAGCATAATCAAGGGTATTCTCATTAGTCATTACTCTGTTTGA 750 0.4253 MAESLDSATSNLLCSENSSTCFDDDLECNGLDGSGTSPSWDHTNLNSDQCPSLGSHGSESFTCFMVQSEETVRVMVKREREHLPRDDYLKRLRSGDLDLSVRREALDWIWKAHAYFGFGPLSFCLSVNYLDRFLSVFELPRGVSWTVQLLAVACLSIAAKMEEIKVPQSVDLQVGEPKFVFEAKTIQKMELLVLSTLRWKMQALTPCSFIDYFLGKITCEKHPVKSSISRSVQLILSIIKGILISHYSV. 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01821 249 CDD CYCLIN_AtCycD-like_rpt1 101 199 - -
Seca9g01821 249 SMART cyclin_7 107 195 IPR013763 -
Seca9g01821 249 Gene3D - 87 201 - -
Seca9g01821 249 SUPERFAMILY Cyclin-like 61 201 IPR036915 -
Seca9g01821 249 ProSitePatterns Cyclins signature. 102 133 IPR006671 -
Seca9g01821 249 PANTHER CYCLINS 68 217 IPR039361 -
Seca9g01821 249 FunFam D2/4-type cyclin 85 202 - -
Seca9g01821 249 Pfam Cyclin, N-terminal domain 72 201 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01821 Seca-Chr9 29633125 29635655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01821 67 242 Core Cell Cycle Gene Families AT5G65420 62.360 2.80e-79 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01821 K18810 - gmx:100794010 364.77