Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01805 ATGCTCGGACCCAATCAACCCGCTCCTAATTCCACTATCAAATTCCTCTGCAGCTACGGCGGCAAAATCCTTCCGCGTTACCCCGACGGCAAGCTTCGCTACCTCGGCGGCCACACTCGCGTCCTCGCCGTTGATCGCTCCGTTCCATTTTCCGAGCTGCTGTCCAAGTTGGAAGAGATGTGCGGTTCGTCCGTGAGGCAACTTCGCTGCCAGTTACCGGCCGAAGACCTCGACGCTTTGGTTTCCATCACCTCCGACGAGGATCTCGCCAATCTCATAGAGGAATACGATCGCGTATCGCCGCCGCCGCCGTCACTCAAGATCAGAGCCTTTCTTTCGCCGCCGAGATCTTTGAACAAGGTTTCCACGCCTCCGTCCTCGTTTCTGTCAAAATCAGCATCTTCCTCCTCCTCCTCCGCATCGTCGTCGTCGTCTTCGTCGTCGTATTGTAGCCTTCCCGGCGGAAATTGTGGACGGAGGTGTGTGGCAGCACCGATAGTGAACCGCTGCGTCCATCAGATGGCGCCACCGACGGCGTATCCAGTAGGCGTGGAGAAATCTTCTCGGAGGAATATTCCTCTGCCACGTTACGGTTACCATGCTCAGGGGAACACTGGCCATGTTTATCTGATCCACAACGGCAACCACTGGCAATAG 657 0.5647 MLGPNQPAPNSTIKFLCSYGGKILPRYPDGKLRYLGGHTRVLAVDRSVPFSELLSKLEEMCGSSVRQLRCQLPAEDLDALVSITSDEDLANLIEEYDRVSPPPPSLKIRAFLSPPRSLNKVSTPPSSFLSKSASSSSSSASSSSSSSSYCSLPGGNCGRRCVAAPIVNRCVHQMAPPTAYPVGVEKSSRRNIPLPRYGYHAQGNTGHVYLIHNGNHWQ. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01805 218 PANTHER OS05G0427100 PROTEIN-RELATED 9 155 - -
Seca9g01805 218 Gene3D - 31 112 - -
Seca9g01805 218 MobiDBLite consensus disorder prediction 116 148 - -
Seca9g01805 218 SUPERFAMILY CAD & PB1 domains 29 120 - -
Seca9g01805 218 CDD PB1_UP2 16 112 - -
Seca9g01805 218 SMART PB1_new 27 113 IPR000270 GO:0005515
Seca9g01805 218 Pfam PB1 domain 29 112 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01805 Seca-Chr9 29370654 29373885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01805 13 112 MAP Kinase Kinase Kinase AT5G57610 49.505 3.12e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01805 - - gmx:100815157 285.419