Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01781 ATGTCCACTTGTAGGGGTTATATGGCTCCAGAGTACATAGTTCTAGGGAAGTTAACTGAGAAAGCAGATGTGTACAGTTTTGGAGTTCTAGTTATTGAGATTGTATCTGGCAAAAGTTGCAGATCCGTTGTTCAAGATTCATGTTCCATCCTACACACGGTTTGGAGCCTTTATGGATCAAATAAGCTATGTGACATTGTTGATCCAATCTTAGAGGGAAATTATCCGGCAGAGGAAGCATGCAAACTCCTTAAGATAGGGCTGCTTTGTGTACAAGCATCTGCAGAGCTGCGACCACCAATAGCAGAGCACAGCCTTCCAGAGAGTGTGATTCAGATCATCCCAAAAATGAAGAAAGTAGTCTCTCTCATCTCTTCTCAGTGCCTTGTGTTCCTTCTCATCAAGTTTCTATTGCTATCAGAAACTGTAATGGCAGAACCAAGAGCCAAGACAGTCCTAATAACGTGTGGCCATCAACTAGAGCACAACACCACTATCTTTGTTCCAAATTTTGTTGCAACTATGGAGAAGATCAGTGAACAGATGCGCAGTACTGGTTTTGGCACAGCAGTTACAGGGACAGGACCTGATACTAACTATGGCTTGGCCCAGTGCTATGGAGATCTTTCATTACTTGACTGTGTGCTATGTTATGCCGAGGCACGCACGGTTCTTCCCCAGTGCTTCCCTTATAATGCTGGTCGCATTTACCTTGATGGTTGCTTCATGAGGGCTGAGAACTATAGTTTCTTTAATGAGTATACAGGACCAGGAGACAGAGCTATATGTGGGAACACAACTAAGAAGAACTCAGGTTTTCAAGCAGCAGCAAAGCAGGCAGTTTTAAGAGCAGTTCAAGATGCACTCAACAACAAAGGCTATGCCCGGGGAAAGGTTGCTGTATCAGGAACAACAAACGAATCTGCTTATGTTCTGGCTGATTGTTGGAGGAATTTGGATACAAGCTCTTGCAAAGCATGTCTTGAGAATGCATCTTCTTCCATATTGGGATGCTTGCCCTTGTCAGAAGGCCGAGCACTCAACACCGGGTGCTTCATGAGGTACTCAGACACAGATTTTCTTAACAAGGAACAGGAAAATGGGAGTTCAAGAGGAAATGTAGTAGTGATTGTGGTTGCAGTAGTCAGTTCACTGATTGTTTCGGTTGTTGGAGTAACTATTGGGGTTTATATCTGGAAACAGAGATACATTCAAAAGAAAAGAAGAGGTTCAAATGATGCTGAAAAGTTAGCTAAGACTCTTCAGTACAAAAGCTTGAATTTCAAGTACTCTACACTGGAAAAGGCTACTGAATCTTTTCATGACAGTAACAAGTTAGGGCAAGGAGGATTTGGAACAGTTTATAAAGGAGTTCTAGCTGATGGAAGAGAGATTGCTATCAAGAGGTTATATTTCAACAACAGACATAGAGCAGCAGATTTCTACAATGAAGTCAACATAATTAGTGGTGTGGAACACAAAAATCTAGTCAGACTATTAGGATGCAGTTGTTCAGGACCTGAAAGCCTGCTTGTATATGAATTTCTGCCCAACAAAAGTCTTGATCGCTATCTTTTTGATAAAAACAAGGGCAGAGAACTGAACTGGGAGAAGAGATATGAAATTATCATCGGGACAGCTGAAGGATTAGCTTACCTGCATGAGAACTCCAAAATCAGGATAATTCATAGAGATATAAAAGCCAGCAACATCCTATTGGATGCAAAGCTTCGTGCTAAAATTGCAGATTTTGGTTTAGCCAGGTCCTTTCAAGACGACAAAAGCCACATAAGTACAGCTATTGCAGGAACTTTGGGGTATATGGCTCCAGAGTATCTAGCTCATGGTCAATTAACAGAAAAGGCAGACGTATATAGTTTTGGAGTGTTGCTGCTAGAGATAGTTACTGGTAGACAGAACAACAGGAGCAAAGCATCAGACTATTCAGAAAGCTTAATTACAGTGACATGGAAGCATTTTCAGTCAGGGACTGCCGAACAATTATTTGATCCAAATCTACAGCTGCATGATGACCAGAATAGCGATGTTAAGAGTGAGATTTTAAGAGTGGTTCACATAGGACTTCTATGCACCCAAGAGATCCCTACATTACGACCAACCATGTCAAAGACACTACAGATGCTAACAAAGAAGGAGGAGGATCTTGTTGCTCCCTCTAATCCACCATTCCTAGATGAGAATACCATGGAACTCCATGACATAAGCGGTGACCCATTTTACCCTCTCAATGCAGCTGATTCAATGGCTACTATGTCCCATAGCTCTTTTTATCCCAGGTGA 2301 0.4194 MSTCRGYMAPEYIVLGKLTEKADVYSFGVLVIEIVSGKSCRSVVQDSCSILHTVWSLYGSNKLCDIVDPILEGNYPAEEACKLLKIGLLCVQASAELRPPIAEHSLPESVIQIIPKMKKVVSLISSQCLVFLLIKFLLLSETVMAEPRAKTVLITCGHQLEHNTTIFVPNFVATMEKISEQMRSTGFGTAVTGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYNAGRIYLDGCFMRAENYSFFNEYTGPGDRAICGNTTKKNSGFQAAAKQAVLRAVQDALNNKGYARGKVAVSGTTNESAYVLADCWRNLDTSSCKACLENASSSILGCLPLSEGRALNTGCFMRYSDTDFLNKEQENGSSRGNVVVIVVAVVSSLIVSVVGVTIGVYIWKQRYIQKKRRGSNDAEKLAKTLQYKSLNFKYSTLEKATESFHDSNKLGQGGFGTVYKGVLADGREIAIKRLYFNNRHRAADFYNEVNIISGVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDRYLFDKNKGRELNWEKRYEIIIGTAEGLAYLHENSKIRIIHRDIKASNILLDAKLRAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKASDYSESLITVTWKHFQSGTAEQLFDPNLQLHDDQNSDVKSEILRVVHIGLLCTQEIPTLRPTMSKTLQMLTKKEEDLVAPSNPPFLDENTMELHDISGDPFYPLNAADSMATMSHSSFYPR. 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01781 766 Gene3D Transferase(Phosphotransferase) domain 1 2 117 - -
Seca9g01781 766 Gene3D Transferase(Phosphotransferase) domain 1 516 726 - -
Seca9g01781 766 Gene3D - 260 360 IPR038408 -
Seca9g01781 766 Gene3D - 149 250 IPR038408 -
Seca9g01781 766 FunFam Putative DUF26-domain receptor-like protein kinase family protein 409 515 - -
Seca9g01781 766 ProSiteProfiles Gnk2-homologous domain profile. 255 360 IPR002902 -
Seca9g01781 766 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 200 738 - -
Seca9g01781 766 CDD STKc_IRAK 446 717 - -
Seca9g01781 766 SUPERFAMILY Protein kinase-like (PK-like) 424 736 IPR011009 -
Seca9g01781 766 ProSiteProfiles Protein kinase domain profile. 440 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01781 766 Gene3D Phosphorylase Kinase; domain 1 400 515 - -
Seca9g01781 766 Pfam Salt stress response/antifungal 263 357 IPR002902 -
Seca9g01781 766 Pfam Salt stress response/antifungal 165 248 IPR002902 -
Seca9g01781 766 SUPERFAMILY Protein kinase-like (PK-like) 5 104 IPR011009 -
Seca9g01781 766 SMART serkin_6 440 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01781 766 ProSitePatterns Protein kinases ATP-binding region signature. 446 468 IPR017441 GO:0005524
Seca9g01781 766 FunFam Cysteine-rich receptor-like protein kinase 2 149 250 - -
Seca9g01781 766 FunFam Cysteine-rich receptor-like protein kinase 3 259 360 - -
Seca9g01781 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 561 573 IPR008271 GO:0004672|GO:0006468
Seca9g01781 766 Pfam Protein tyrosine and serine/threonine kinase 443 710 IPR001245 GO:0004672|GO:0006468
Seca9g01781 766 Pfam Protein tyrosine and serine/threonine kinase 7 40 IPR001245 GO:0004672|GO:0006468
Seca9g01781 766 FunFam Cysteine-rich receptor-like protein kinase 2 516 723 - -
Seca9g01781 766 ProSiteProfiles Gnk2-homologous domain profile. 149 250 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01781 Seca-Chr9 29094034 29102785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01781 133 766 Receptor kinase-like Gene Family AT1G70520 69.122 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca9g01781 PK_Tyr_Ser-Thr 8.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01781 - - gmx:100305420 1141.72