Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01736 ATGGCATCAAGATCATATGCTAATCTACTAGACTTAGCTGGAGGTTTTCTGGATATTCCTCCCACCCCAAGAACTATTCCAAGGATTATGACTGTTCCTGGAGTTATTTCTGACCTGGATGGTTATGGTAGAGATGGGGATTCAGATGTTAGCTCTTCTGGTTATCGGGAGCGGAAAATCATTGTGGCGAACATGTTGCCATTGCATGCTAAAAGAGATATAGTAACTGCTAAATGGTGTTTCAGTTTGGATGAGGATTCAATTTTGTTACAATTAAAAGATGGTTTTTCTTCTGACACTGAGGTGATCTATGTGGGATCCCTCAAGGTTGAAATAGATGCCAGCGAGCAGGAAGAAGTTGCTCAGAAATTACTGGAGGACTTTAATTGCATACCTACCTTTCTACCCCATGATCTCCAGAAAAAGTTTTATCTTGGTTTTTGCAAGCAGCAGCTTTGGCCTCTTTTTCATTACATGCTACCTATGTGTCCTGATCATGGTGACCGGTTTGACCGCTTGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATATTTGCGGACAAGGTGATGGAAATAATCAATCCTGATGATGATTTTGTTTGGGTTCATGATTATCACTTGATGGTTTTGCCTACATTCTTGAGGAAGCGGTATAATCGAGTTAAACTTGGTTTCTTTCTTCACAGTCCTTTCCCTTCATCTGAAATTTACCGAACTTTGCCAGTAAGGGATGAAATTCTGAGGGGATTGCTAAATTCTGATTTAATTGGTTTTCATACATTTGATTATGCTCGCCACTTCCTCTCTTGCTGCAGTAGAATGCTTGGTCTGGACTATGAATCTAAGCGAGGACATATAGGACTTGATTACTTCGGTCGTACTATATTTATCAAAATTTTGCCTGTGGGCATTCACATGGGTAGGCTTGAATCTGTATTAAATCTCCATTCTACATCTGCTAAATTGAAAGAGATTCAGGAAGAGTTTAAGGATAGGAAGGTGATTCTTGGTGTTGATGACATGGATATTTTCAAGGGCATCAGTCTGAAGCTCCTAGCTGTTGAGCAGCTGCTGCTGCAGAATCCAGATTTGCAGGGCAAAGCTGTCCTAGTTCAGATTGTGAATCCTGCTAGGGGTTCAGGGAAGGATGTTCTGGAAGCAAAGAAGGAAACATATTTAATTGCCCAGAGGATTAATAATACTTATGGTTCAAACCAATATCGGCCAGTTATTCTCATTGACCGTCCTGTTCCTCGTTTTGAGAAGAGTGCATATTATGCTGCAGCAGAATGTTGTATTGTCAATGCTGTGAGGGATGGTATGAACTTAGTCCCATACAAATATATTGTCTGCAGACAAGGAACTGCACAATTGGATAAAGCTTTGATTAGAAAAGGTGATACCCCTCGTACAAGCATGCTTGTTGTGTCTGAGTTCATCGGTTGTTCTCCTTCTCTAAGTGGAGCAATCAGGGTAAATCCCTGGGACATAGATGCTGTGGCTGATGCTCTTTATTCAGCCATTACTATGCATGATTCAGAAAAGCAATTGAGGCATGAGAAACACTACCGATATGTCAGTTCTCATGATGTGGCGTACTGGGCACGCAGCTTTATGCAGGATTTGGAGAGAGCATGCAAAGATCATTACACGAAAAGATGCTGGGGAATGGGTTTGGGTCTAGGGTTTAGAGTTGTTTCTCTTTCTCCTGGTTTTAGGAAATTGTCTGTTGACCATATTGTTTCGGCATACAAAAGAACCAGTAGAAGAGCCATATTTCTTGATTATGATGGTACTGTTGTACCACAATCTTCTATAAATAAAACCCCCAGCCCCGAAGTCATCTCTGTGCTAAATGATCTGTGTAATGATAGTAAAAATACCGTGTTCATTGTGAGTGGTAGGGGAAGAGATTCTTTAAGTGACTGGTTTTCTTCATGCAAAATGATGGGACTTGCAGCTGAACATGGATACTTTTTAAGGTGGAGTAAAGATTCTGAATGGGAAACGAGTCACTCGTCAGCTGATCTTGAGTGGAAGAATATTGTTGAACCTGTCATGCAGCTGTATATGGAGGCAACTGATGGATCTAATATTGAAATTAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGTTCTTGCCAAGCGAAAGAACTGTTGAATCACCTGGAAAGTGTGCTTGCTAATGAACCTACAGTTGTCAAGAGAGGCCAGCATATTGTTGAAGTCAAGCCACAGGGAATAAGCAAGGGCTTGGTAGCTGAAAAGATTCTTTCCACTATGGTTGATGGTGGTAATCCACCAGATTTTGTAATGTGCATTGGAGATGATATTTCTGATGAAGACATGTTTGAGAGCATATTAAGGACAGTTTCATGCCCATCATTGCCAGTAGCTCCAGAGATCTTTGCCTGCACTGTTGGTCAAAAACCTAGCAAGGCCAAGTATTATCTTCATGATCCTGCTGATGTCATGAAGTTGCTTCAAGCACTTGGCACTTCATCTAATCCAAAGCCCAGGCATCTGGCTCAATTCCAAGTTTCTTTTGAGAGCACGGTTTGA 2580 0.4128 MASRSYANLLDLAGGFLDIPPTPRTIPRIMTVPGVISDLDGYGRDGDSDVSSSGYRERKIIVANMLPLHAKRDIVTAKWCFSLDEDSILLQLKDGFSSDTEVIYVGSLKVEIDASEQEEVAQKLLEDFNCIPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPMCPDHGDRFDRLLWQAYVSANKIFADKVMEIINPDDDFVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLESVLNLHSTSAKLKEIQEEFKDRKVILGVDDMDIFKGISLKLLAVEQLLLQNPDLQGKAVLVQIVNPARGSGKDVLEAKKETYLIAQRINNTYGSNQYRPVILIDRPVPRFEKSAYYAAAECCIVNAVRDGMNLVPYKYIVCRQGTAQLDKALIRKGDTPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALYSAITMHDSEKQLRHEKHYRYVSSHDVAYWARSFMQDLERACKDHYTKRCWGMGLGLGFRVVSLSPGFRKLSVDHIVSAYKRTSRRAIFLDYDGTVVPQSSINKTPSPEVISVLNDLCNDSKNTVFIVSGRGRDSLSDWFSSCKMMGLAAEHGYFLRWSKDSEWETSHSSADLEWKNIVEPVMQLYMEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLNHLESVLANEPTVVKRGQHIVEVKPQGISKGLVAEKILSTMVDGGNPPDFVMCIGDDISDEDMFESILRTVSCPSLPVAPEIFACTVGQKPSKAKYYLHDPADVMKLLQALGTSSNPKPRHLAQFQVSFESTV. 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01736 859 Gene3D Glycogen Phosphorylase B; 311 527 - -
Seca9g01736 859 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 719 850 - -
Seca9g01736 859 Pfam Glycosyltransferase family 20 58 543 IPR001830 GO:0003824|GO:0005992
Seca9g01736 859 FunFam Trehalose-6-phosphate synthase 2 673 752 - -
Seca9g01736 859 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 51 310 - -
Seca9g01736 859 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 28 838 IPR001830 GO:0003824|GO:0005992
Seca9g01736 859 CDD HAD_TPP 591 832 - -
Seca9g01736 859 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 58 547 - -
Seca9g01736 859 SUPERFAMILY HAD-like 590 838 IPR036412 -
Seca9g01736 859 CDD GT20_TPS 58 543 IPR001830 GO:0003824|GO:0005992
Seca9g01736 859 Gene3D Glycogen Phosphorylase B; 52 310 - -
Seca9g01736 859 Gene3D - 719 849 IPR023214 -
Seca9g01736 859 Gene3D - 589 703 IPR023214 -
Seca9g01736 859 FunFam Alpha,alpha-trehalose-phosphate synthase 312 527 - -
Seca9g01736 859 NCBIfam HAD-IIB family hydrolase 591 792 IPR006379 -
Seca9g01736 859 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 589 706 - -
Seca9g01736 859 Pfam Trehalose-phosphatase 593 827 IPR003337 GO:0003824|GO:0005992
Seca9g01736 859 NCBIfam trehalose-phosphatase 588 837 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01736 Seca-Chr9 28488983 28494445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01736 1 859 Trehalose Biosynthesis Gene Families AT1G23870 74.625 0.0 1351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01736 K16055 - gmx:100818536 1588.55