Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01730 ATGGAAGAACATCTCACTCCATTGGCTGTTACCCATCTCCTTCAACACACTCTCAGAAGTTTGTGCATCCATGAAAATTCTCAGTGGGTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAGTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGGAGGAATTGGATATTGGTCTGGGAAGATGGTTTCTGCAATTTTGCTGCCTCAGCAGCACCTGAAATTAACTCTGGTGATTGTCCTTCCTCATCTGTTTATGGGAACTGTGAATACCAGCCCTACCAAGGCCTTCAACCTGAGCTCTTCTTCAAGATGTCGCATGAGATCTATAACTATGGAGAAGGGTTGATAGGAAAAGTAGCTGCAGATCACAGTCACAAGTGGATATACAAAGAACCTAATGATCAAGAAATCAACTTCCTGTCAGCATGGCACAATTCAGCAGACTCAGTAAGGAAAAAAAAAGAAAAACACCCCTTATATATCTTGCTTATTCTTCTTACAGAGTGA 531 0.4294 MEEHLTPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAPEINSGDCPSSSVYGNCEYQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSVRKKKEKHPLYILLILLTE. 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01730 176 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 161 - -
Seca9g01730 176 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 146 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01730 Seca-Chr9 28399393 28401910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01730 13 146 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 26.866 1.07e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01730 - - vun:114173114 345.125