Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01729 ATGGTGAGTGTAACAGCAGCAATGGTTGCAGCTCAGTTGTTGGAAGTGGGATTGAACACTCTAATCAAGGCAGCCACCACTGATGGAATGAGTGATTTTGTTTTCATTGTCTACTCTAACCTTTTTGCTCTCTGCTTCTTCCTTCTACCATCCACACTTCTTTACCACAGGAAGAAACCTCCTCCCCCAATCTCAACCTCAATTCTCTGCAGAATATTTCTTCTTTGCTGCCTCAGTACTGCAGTGCAGACGTTGATGTACACTGGAATTGGATATAGCTCTCCCACTCTGGCCTCAGCTATGTTGGACCTTCTCCCTGCTTTTACCTTCATACTTGCTCTCATCTCCAGGATGGAAAAACTGAATCTGAAACTGCATAGCAGCCAAGCAAAAATAATTGGCACTGTGGTCTCCATTGCAGGGGCATTAATCGTGACTTTATATAAAGGAATGCCATTAACTAGTAGTTCCATGCCAAATATGGTATTGGGTGGAAATGGAAGTAGTTACCTCTCAGTGCAATCAGAGTGGTTATTTGGTGGTTTTCTTCTTGCAACTGCTAGCTTTTGCCTTTCAGTTTTGTTCATTGTCCAGACTTGGATTATCAGGGACTATCCTCAAGAGCTAGTGGTAACAACCATTTGTTGCAGCATGGTGGTAATCCTATCCGCCATAGTAGCTCTCATTGCTGAGGGAAATGCAGAGGCTTGGATACTCAAACCTGATAAGGAATTGGCAGCTGTGTGTTATTCAGCAATTTTTGTGGTATCAATGCGGAGTATTGTGACGGCATGGGCATGCCGTAAGAAGGGACCAGTTTTTGTAGCTATGTTCAACCCTTTAGGAATGGTAATTGCACTTGGCATGGGGGTTATATTTCTTGGAGACAGTCTTTATCTGGGAAGTATGATTGGAGCCGCTACAATAGCTATTGGATTTTATGCTGTGATGTGGGCACAGGCTCAAGAGGAAAACACCATCAATGAGAAGAATGATTTTGTCTCATCTTCTGCCCCTCTGTTGTCCAATAAAAGCATGGATGTGTAG 1047 0.4346 MVSVTAAMVAAQLLEVGLNTLIKAATTDGMSDFVFIVYSNLFALCFFLLPSTLLYHRKKPPPPISTSILCRIFLLCCLSTAVQTLMYTGIGYSSPTLASAMLDLLPAFTFILALISRMEKLNLKLHSSQAKIIGTVVSIAGALIVTLYKGMPLTSSSMPNMVLGGNGSSYLSVQSEWLFGGFLLATASFCLSVLFIVQTWIIRDYPQELVVTTICCSMVVILSAIVALIAEGNAEAWILKPDKELAAVCYSAIFVVSMRSIVTAWACRKKGPVFVAMFNPLGMVIALGMGVIFLGDSLYLGSMIGAATIAIGFYAVMWAQAQEENTINEKNDFVSSSAPLLSNKSMDV. 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01729 348 PANTHER WAT1-RELATED PROTEIN 5 329 IPR030184 GO:0016020|GO:0022857
Seca9g01729 348 Pfam Uncharacterised protein family (UPF0220) 97 231 IPR007919 -
Seca9g01729 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 321 - -
Seca9g01729 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 149 - -
Seca9g01729 348 Pfam EamA-like transporter family 179 317 IPR000620 GO:0016020
Seca9g01729 348 Pfam EamA-like transporter family 17 146 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01729 Seca-Chr9 28369984 28371793 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01729 7 332 Nodulin-like Gene Family AT3G28050 46.483 8.89e-85 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01729 - - gmx:100793168 518.079