Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01728 ATGGAAGGCAGAGGTGTAACCACTGTAATGATTGCGGTTCAGGTTTTGCATGTAGGTTTGAACACTCTGATAAAAGCCTCCATATCTAAGGGAATGAGCAATTTTGTTTTTGTTGCATATTCAGACCTCCTTGCATTCTGTTTCCTTGTACCATCAACCGCAATCTATCACAGAAACAGAGCTCCTCCACCAATTAATATATGGCTTGTCTTCAGAATGTTTGTTATTGGCGTGCTCAGCATTTCCTCACAGACACTACTCTATACTGGACTGCGCTATAGCTCTCCCACTCTGTACTCAACCATGGAGGATCTTATTCCAGCTTATACTTTCATAATTGCCATTATAACCAGGATGGAAAAGCTGGATCTAAAACTACCAAGTTGCCAGGCAAAATCCATTGGCACTATGGTCTCCATTGCAGGAGCATTAACCGTGACTTTATACAAAGGGTTGCCTCTAACTCGCGGTGTGGTGCCATTGCCAAACAATGTGCTAGGTGGGACTTTCCTCTCATCCCAGCAATCAGAATGGCTACTAGGAGGCTTTCTCCTTATAGCTGGTACTTTTAGTGCTTCAGTCACGCTTATCTTCACGACCTGGACTATCAAAGACTATCCTGCAGAGTTAATGGTGACAACCATTTCTTGCAGTTTCGTTGTTCTCCTATCATTCATAGTAGCTTTCATTGCTGAGCAAAATCCCAACGCTTGGATACTCAAACCTGATATCAACTTGCTAACTATATTCTTTACGGCAATTTTTTCGATATCTATGCGAAGTGTGGTGTATACATGGGCGTGTCGCAAGAAGGGCCCTGTATATGTTGCTATGTTCAACCCTTTAGGAATTGTTATTGCACTTGCCATGGGGGTTCTATTTCTTGGAGATGTTCTATATCTTGGAAGTATGATAGGTGCTGCTATAATAGGTAGTGGGTTTTATGCTGTGTTATGGGGCCAGAATAAAGAGGAAAAGATGATTCGTGAAAAACATGAAGAAGCCATGAATGATATTCATGGATTGGCTATGGCTGGTGGGTGTAATGATATAGGTTCACCTTTCGCCCTTTCTTTTCGTCATCCAGGTAGCTCATCGAAAATCCCTATTAACACTGATTCTGATGTTCTTGACATGTTCAAGTTAAATAGAAAGTGCACTTGCATCCGTGTGTATGCTAGTTTGCTAAATTGTAAGGATAATGGAGTTGGAGTTGGTAATTCTGAAGTAGTAGTTAGTGAGTCTGATGATGAATGGAGCGTAGGTGGTGAATATCAACAAGATGACGGTTTAGAAACTGATTATGATCCTAGTTTTATAGTTGAGGAATAA 1332 0.4114 MEGRGVTTVMIAVQVLHVGLNTLIKASISKGMSNFVFVAYSDLLAFCFLVPSTAIYHRNRAPPPINIWLVFRMFVIGVLSISSQTLLYTGLRYSSPTLYSTMEDLIPAYTFIIAIITRMEKLDLKLPSCQAKSIGTMVSIAGALTVTLYKGLPLTRGVVPLPNNVLGGTFLSSQQSEWLLGGFLLIAGTFSASVTLIFTTWTIKDYPAELMVTTISCSFVVLLSFIVAFIAEQNPNAWILKPDINLLTIFFTAIFSISMRSVVYTWACRKKGPVYVAMFNPLGIVIALAMGVLFLGDVLYLGSMIGAAIIGSGFYAVLWGQNKEEKMIREKHEEAMNDIHGLAMAGGCNDIGSPFALSFRHPGSSSKIPINTDSDVLDMFKLNRKCTCIRVYASLLNCKDNGVGVGNSEVVVSESDDEWSVGGEYQQDDGLETDYDPSFIVEE. 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01728 443 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 149 - -
Seca9g01728 443 PANTHER WAT1-RELATED PROTEIN 8 331 IPR030184 GO:0016020|GO:0022857
Seca9g01728 443 MobiDBLite consensus disorder prediction 429 443 - -
Seca9g01728 443 MobiDBLite consensus disorder prediction 416 443 - -
Seca9g01728 443 Pfam EamA-like transporter family 10 146 IPR000620 GO:0016020
Seca9g01728 443 Pfam EamA-like transporter family 180 318 IPR000620 GO:0016020
Seca9g01728 443 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01728 Seca-Chr9 28364820 28369059 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01728 10 327 Nodulin-like Gene Family AT5G40240 41.745 1.98e-75 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01728 - - gmx:100814600 459.144