Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01724 ATGGAAATAGTATATTGGAGACGTTTTAGCAGCCAAGCTAAAATTATAGGAACAATAGTATCAGTTACTGGCGCATTTGTTGTGATATTCTACAAGGGCCCACCAATCTTCAAGAGACATTCTAACAAGCTTCAATTTTCACCCCAATTGAACTGGATCTTGGGAGGGTTGTTCCTTGCTGGCGATTCTTTGCTTTGTTCCATGTGGTACATATATCAGACATTTCAGGCTTCAGTTACAAGGAAATACCCTGTTGTAACAGTCATAGTCTTCTTCCAAATCTTATTTACAACCATTCAGTCGGCAGTATTTGCCTTAATTGTAGTTAGAGATCCAAGCGCATGGCAGCTAAAGCTTGATATGGGGTTGATTGCCATTTTATACCAGGCAATAGCTGCAACAGTGATACGCTATATGCTAACCACATGGTGCGTCCAAAAAGCCGGTCCTCTGTTTTGTGCTATGTTCAAGCCAGTGGGGATCATCTTCACCGTCTTCATGGGTGCAATTTTTCTTGGGGATGATCTTAACCTTGGAAGTTTGATTGGTGCGGTTATAATAGTGGTAGGATTTTATGCTGTGCTGTGGGGAAAAGCCAAAGAAGAGGACAAGATTGAGAGGTTGGAGTCGTCATGCCATAATAATGTTCCTCTGTTACAAAACAAGGCGTAA 672 0.4152 MEIVYWRRFSSQAKIIGTIVSVTGAFVVIFYKGPPIFKRHSNKLQFSPQLNWILGGLFLAGDSLLCSMWYIYQTFQASVTRKYPVVTVIVFFQILFTTIQSAVFALIVVRDPSAWQLKLDMGLIAILYQAIAATVIRYMLTTWCVQKAGPLFCAMFKPVGIIFTVFMGAIFLGDDLNLGSLIGAVIIVVGFYAVLWGKAKEEDKIERLESSCHNNVPLLQNKA. 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01724 223 PANTHER WAT1-RELATED PROTEIN 1 206 IPR030184 GO:0016020|GO:0022857
Seca9g01724 223 Pfam EamA-like transporter family 66 195 IPR000620 GO:0016020
Seca9g01724 223 SUPERFAMILY Multidrug resistance efflux transporter EmrE 119 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01724 Seca-Chr9 28351861 28353729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01724 1 222 Nodulin-like Gene Family AT3G28070 40.948 1.61e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01724 - - gmx:100792109 335.88