Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01721 ATGTCTGCAGCATTGGTGAGAATTGTTCTCCCGCTATCACTGCTTGCATTGCTTGTAGCTGTAACTGAGGCAGGCCTTCTACCGCACAAAGTGCATGAGGTAGTCATAAATAATTTGCCAAATAACAAAACTCTGATCCTTCATTGCTACAAAAGGAAAGGTAAAGATCTTGGAGTGACAGTCCTCCGTTCTGGTGCGACCTTCGAATTTACTTTCAGGCCAAGGCTTATTGGCTCCACAAAGTACTATTGCAGCTTCCAATGGAGAGGTGTCTTTTACTGGTTTGACTTATACACCAAACACAGGGATCATAAGAAATGCAAGAACTGCAGTTGGAGTGTCAAAGAGGAAGCCATCTGTAGGTTCAACTATAACACCCATGCCTTTAGTGATTGTTATTACTGGAAGAAAATCTGA 417 0.4245 MSAALVRIVLPLSLLALLVAVTEAGLLPHKVHEVVINNLPNNKTLILHCYKRKGKDLGVTVLRSGATFEFTFRPRLIGSTKYYCSFQWRGVFYWFDLYTKHRDHKKCKNCSWSVKEEAICRFNYNTHAFSDCYYWKKI. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01721 138 Pfam Plant self-incompatibility protein S1 34 135 IPR010264 -
Seca9g01721 138 PANTHER - 28 125 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01721 Seca-Chr9 28343933 28344349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01721 6 135 Carbohydrate Esterase AT3G16970 28.358 3.31e-20 79.0