LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca9g01713	ATGAGGACAAAATCTAATAGGAAGAGTGATGTTGTCGAACCCGAAAAATCTAATTCACCTCCTAAACATAATGTTGATTCATATGAGATTGTTGATGGTTATAAAAAGATATCTAAACTTACAGATGAGGATATCAGAGCTTTTGAGTTTGATTCTGAAGAAGATGCATATGTTTTTTACCGTGAGTATGCAAAATTCATAGGGTTTGCTGTTAGGAAACATCATGTGTATAGAGATCGTAATGATGTAATTACAATGAGACAATTTGTATGTAACAAGGAGGGAGAGAGAAGTGGGAAGCACCTTAATATGACTGGTAGAAAGAGGGAGGCAAAGGCCATTACACGAACAAGATGTAATGCAAGGCTCCGAATTCATTTAGATTATAAGAGTAGAAAGTGGATCGTTGGTTCTTTTGAGACAACCCATAACCATGAATTGACTCCTGCTAGTATGGTTCATTTGTTGCCAGCTTATCGCGGGTTGAGTGTAGATGATAAGGCACAGGTTGACGGTCTACATCATTACGGTGTTAGGACTTGCCATATTATGAGGCTTATAATGGGTCAGAAGGGGGGTTATTATGATCTTGGATTCTGTAAGAAGGATTTGTACAATCACATTGATAAGGTGAAGAGGGCAAAAATTGAGGATGGTGATGCTTTTGCAGCTTTATGTTACCTTCGGGCAAAGTTTGATAACAATACACTTACCTTTGTAAAGTTTACAACAACTGAAGATGATAAACTTGAAACTTGTTTTGGGCTGATGTAG	774	0.3747	MRTKSNRKSDVVEPEKSNSPPKHNVDSYEIVDGYKKISKLTDEDIRAFEFDSEEDAYVFYREYAKFIGFAVRKHHVYRDRNDVITMRQFVCNKEGERSGKHLNMTGRKREAKAITRTRCNARLRIHLDYKSRKWIVGSFETTHNHELTPASMVHLLPAYRGLSVDDKAQVDGLHHYGVRTCHIMRLIMGQKGGYYDLGFCKKDLYNHIDKVKRAKIEDGDAFAALCYLRAKFDNNTLTFVKFTTTEDDKLETCFGLM.	258

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca9g01713	257	PANTHER	OS01G0519700 PROTEIN	45	254	-	-
	Seca9g01713	257	MobiDBLite	consensus disorder prediction	1	25	-	-
	Seca9g01713	257	Pfam	FAR1 DNA-binding domain	59	148	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca9g01713	Seca-Chr9	28275239	28276012	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca9g01713		FAR1	1.7e-21	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca9g01713	-		-	ccaj:109792835	252.677