Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01691 ATGCCGGGACGTCGGTCAAAGTCGGAGAAGAACCCCGAGGGCGAGAAGCAGCTCCGGCGGGACCCCTATGAGGTCCTCGGCGTCTCCCGCAACTCCACCGATCAGGAAATCAAAACCGCTTACCGGAAAATGGCCCTCAAATACCATCCTGACAAGAATGCTAATGATCCTAAAGCAGCTGATATGTTTAAAGAGGTTACCTTTTCTTATAATATCTTGTCAGATCCCGACAAACGGCGTCAGTATGACTCAGCTGGCTTTGAGGCTGTTGAATCAGATAACCAAGAGTTGGAGTTGGATCTTTCAAGTTTGGGTGCTGTCAATACAATGTTTGCTGCACTTTTTAGCAAACTTGGTGTACCAATAAAAACAACTGTATCTGCAACTATTTTGGAGGAGGCACTCAATGGTTTAGTGACCATTCGTCCACTTTCATTAGGACAGTTTATATCTAAAAGGGTTGAGAAGCAATGTGCACATTTCTATTCAGTTACAATAACAGAAGAGGAAGCACGGGCTGGATTTGTTTGTCGAGTGCAATCATCAGACAAAAGCAAGTTCAAGGTTGGAATTTAA 576 0.4444 MPGRRSKSEKNPEGEKQLRRDPYEVLGVSRNSTDQEIKTAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSAGFEAVESDNQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATILEEALNGLVTIRPLSLGQFISKRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKVGI. 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01691 191 Gene3D DnaJ domain 5 105 IPR036869 -
Seca9g01691 191 PRINTS DnaJ domain signature 41 56 IPR001623 -
Seca9g01691 191 PRINTS DnaJ domain signature 78 97 IPR001623 -
Seca9g01691 191 PRINTS DnaJ domain signature 23 41 IPR001623 -
Seca9g01691 191 PRINTS DnaJ domain signature 58 78 IPR001623 -
Seca9g01691 191 MobiDBLite consensus disorder prediction 1 31 - -
Seca9g01691 191 FunFam Chaperone protein dnaJ 16 4 103 - -
Seca9g01691 191 SMART dnaj_3 20 78 IPR001623 -
Seca9g01691 191 CDD DnaJ 21 75 IPR001623 -
Seca9g01691 191 MobiDBLite consensus disorder prediction 1 23 - -
Seca9g01691 191 ProSitePatterns Nt-dnaJ domain signature. 63 82 IPR018253 -
Seca9g01691 191 ProSiteProfiles dnaJ domain profile. 21 86 IPR001623 -
Seca9g01691 191 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 6 188 - -
Seca9g01691 191 Pfam DnaJ domain 21 83 IPR001623 -
Seca9g01691 191 SUPERFAMILY Chaperone J-domain 20 90 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01691 Seca-Chr9 28028619 28031463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01691 19 84 C2H2 Transcription Factor Family AT1G74250 42.254 2.36e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01691 - - lja:Lj2g3v1370280.3 348.206