Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01676 ATGATGGAACCTACTGAAACTGACAAAACTTTTGAGGGTGATCCCAAAAATTCTAAATCCCCCAATAAAGATAATTTGGATTCTGATAAGGATCCTGAAGTTTGGAAAAGGATAAGTGAACTAACAGATGAGGATATCAGAGGGCTTGAGTTTGATACTGAAGAGGATGCATATGATTTCTACCGTGAGTATGCTAAATTCATAGGATTTTCTGTAAGGAAAGGTGATGTGTATAGAAATTGTAATGGTACAATTACAATGAGGCAATTGGTTTGTAATAGAGAGGGAGAGAGAAGTGAGAAGCATCTTAATAGGACTGATAGAATTAGGGAGGCAAAGGCCCTCACCCGAACTGAGTGTAAAGCAAGGCTCCGTGTTTCCTTAGATTATAGAAGTAGAAAGTGGAGGGTTGGAATCTTTGAGCCAGCTCATAACCATGAATTGACTCCTGCAAGTATGATACATTTGCTACCTGCTTATCGTGGGTTGAGTGTAGCGGATAAGGCACAAGTTGACGGTCTACATCATTACGGTGTCAGGACTTGTCATATAATGGGTCAAAAGGGAGGTTATTCTGATCTTGGTTTTTGTAAGAAGGATTTGTACAATCATATTGATAAGGAGAATCGGGCAAAAATAGAGGATGGGGATGCATTTGCTGCGTTATGCTACCTTCAATCTAAGCTTAACAAGGCTGCACGTAGAAATCCTCACAATTTTGTAAAGAACATTGAATCTATTCATAAGTTGGCAGAACAGATGGAAAGGCAGGAAGGTATTGACTTGAACGTTGCTGATATATCAAGAGCTGTTCGTGACCCAACTGTTGTTAAAACTAAAGGGCACACAGTTAGGACATGCACTAAATATGCTACTCGTGATCAGTTGGATACAGTTATTGAAGAGGAATCATCTGTTGAGACTGATGAAGATTCAAGAGATGAAAGTAGGTCACGGGATGTTCACATTTCTAACCATTTGAATGATGTAACAGTCTCTGCTGGTCAGAATTGTGCTTCAGACAAGGGTCAGTCTAAGAAGAGAAGGAGAAATAGTGAAGGTTTGAAAATGACCCAAGAATCTGTTAATGAAAGAAGGTCCAGTGATGTGAACAAATGTCAACAGAATGATACTGGTGTTGCATTCAGCAGAATAAATACCCCCTCCTTATTTGGTAATCATGTGTACTATTCAAACATGAATGGTCCGAGTATTTCAAGACCTGTGCATATTAGACCTTCCATGATTCATGGATTTGGGCAAGGATTTGTTGGTAATATAGTTGAGGACATGCTACAGTATCCCCAAATGTATATGCAGCAATCTATGTATACACCTCCAGTAGTTCATAACTTTGACCAATATGGGGGAGTCCCCACAGCAGCAGGTGGAGGAGGCACTACACCAGCAGGGGGAGGCACCACAGCAGCAGGGGGAGGAGGCACTACACCAGCAGGGGGAGCCACCACAGCAGCAGGTGGAGGAGGCACCACATCAGCAGGTGGAGGAGGCACTACAGAAGCAGGGGGAGGCACCATATAA 1542 0.4209 MMEPTETDKTFEGDPKNSKSPNKDNLDSDKDPEVWKRISELTDEDIRGLEFDTEEDAYDFYREYAKFIGFSVRKGDVYRNCNGTITMRQLVCNREGERSEKHLNRTDRIREAKALTRTECKARLRVSLDYRSRKWRVGIFEPAHNHELTPASMIHLLPAYRGLSVADKAQVDGLHHYGVRTCHIMGQKGGYSDLGFCKKDLYNHIDKENRAKIEDGDAFAALCYLQSKLNKAARRNPHNFVKNIESIHKLAEQMERQEGIDLNVADISRAVRDPTVVKTKGHTVRTCTKYATRDQLDTVIEEESSVETDEDSRDESRSRDVHISNHLNDVTVSAGQNCASDKGQSKKRRRNSEGLKMTQESVNERRSSDVNKCQQNDTGVAFSRINTPSLFGNHVYYSNMNGPSISRPVHIRPSMIHGFGQGFVGNIVEDMLQYPQMYMQQSMYTPPVVHNFDQYGGVPTAAGGGGTTPAGGGTTAAGGGGTTPAGGATTAAGGGGTTSAGGGGTTEAGGGTI. 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01676 513 MobiDBLite consensus disorder prediction 298 374 - -
Seca9g01676 513 MobiDBLite consensus disorder prediction 342 371 - -
Seca9g01676 513 Pfam FAR1 DNA-binding domain 59 149 IPR004330 -
Seca9g01676 513 MobiDBLite consensus disorder prediction 325 341 - -
Seca9g01676 513 MobiDBLite consensus disorder prediction 1 32 - -
Seca9g01676 513 MobiDBLite consensus disorder prediction 310 324 - -
Seca9g01676 513 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 198 - -
Seca9g01676 513 MobiDBLite consensus disorder prediction 466 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01676 Seca-Chr9 27737161 27741526 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g01676 FAR1 7e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01676 - - ccaj:109792835 240.736