Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01665 ATGGAGATGGACGGTGTCGTTTCTTTTGATGTCTTGCCGGAGGATTCTGAAGAGGTTCATGTCTTGGCCGTCGATGACAGTCTCGTTGATCGAAAGGTCATTGAGCGGTTACTCAAAATTTCAGCTTGTAAAGTTACTGCAGTGGATAGTGGAATCAGAGCACTGCAATTTTTGGGGCTGGATGAGCAGAGAAAGACCACTGAATCTGATGGTTTTGTTAAGGTGGATCTAGTTATCACTGACTATTGCATGCCTGGAATGACTGGTTATGAGTTGCTCAAGAAAATCAAGGTTAAAAATTGGATTCCTAAGCCTTTCATTTTTATCATGTTATTCATAATGTTAGTGAAAACTGGTTGA 360 0.4083 MEMDGVVSFDVLPEDSEEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRKTTESDGFVKVDLVITDYCMPGMTGYELLKKIKVKNWIPKPFIFIMLFIMLVKTG. 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01665 119 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 103 IPR045279 GO:0009736
Seca9g01665 119 Pfam Response regulator receiver domain 21 107 IPR001789 GO:0000160
Seca9g01665 119 SUPERFAMILY CheY-like 19 109 IPR011006 -
Seca9g01665 119 ProSiteProfiles Response regulatory domain profile. 20 119 IPR001789 GO:0000160
Seca9g01665 119 Gene3D - 15 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01665 Seca-Chr9 27651116 27652781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01665 1 97 Response Regulator Gene Family AT1G10470 69.072 6.96e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca9g01665 Response_reg 5.9e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01665 K14492 - gmx:100779833 165.622