Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01664 ATGGCTCTGAAGGTAATGTTTCTTCTGAGCCTTGTTGTTGTTTTACAAAGTTTTGTAATACCAACTTGCCATTGCCAGATCAGTTTTCCTCCTCAGAATATTGAAACTTTCTATCCCATTGAAACTCCAGAACCAGAAATTCCCCCAACACAACCTCCTGAGCCACCACCAAAGCAACCACTATCACCAGGGCCGGGACCAGTGGCAGCATCATCAAGTTCTTCATCAAACAATAAGGTGGTAACAGCAGTAGCTGCAACTGCAGCAAGTACTCTAATTGTTTCTGGTTTGATTTTCCTTTTAGTTCAAAGATGCTTAAGAACAAGGAGGAGAAAGGTGATGACCAACACTGCTTCTGCTGCACAAAGGCCTGTTGTGCCTCAGGTAAGTGTGTTTGAGAGAATGGATGGAAACATCAAGGGACTTATTGTTGATGAGGATGGTTTGGATGTGGTTTATTGGAGAAAACTTGAAGGTAAAGGTAAAAACTCAAACAAGGGTTTTCAAAAGGAGGTCTTGCATAGTCCCAAAAATGAAGAAGATGATGATCATGAAGGAAAACAAGGGAAAAAATCTGAGTCCATTCAGGAAATTCCTCTGCTTAGAGGGAAATCTTCAACTTCCCAATTGGATATATTTCCAGAAGAGTCATATACAATTATGAGAATTCTACCTCCTGCTCCTCCTCCCATTGTTCCTATTGCTAGCAAGAGTGTTAAAAAACCAGACTCTCCTACTAAACCATTTAATCTAGCCCTTCTACCTTCATCACCAAAAAGACCCTCCACTTCTTTCTCATCAATTCCAAAAATGACAACTCCTGCACCACCACCTCCCCTTCCAACAATACCTGATAGAAAGAGTCAAACACCAGAACCTCCTCCTCCTCCACCTCCACCTCCACCAATTGCAGATAGAAAGAGCTTAGCATCACTACCTCCTCCTCCACCAATCCCTGCTAGAAAGAGTCCTGCACCACCACCACCTCCTCCACCAATCTCTTCTAAAAAGAGTTCAGCACCACCTCCTCCTCCACCAAAGGTAGGTGGTTTTAAGTCATCATCAAAACCACCACCAATCCCTATTGAAAAACCAGTTTCCACCAGCAAGCAAGAAAGTTCTTCAGGTGAAGTAAAACTGAAGCCACTGCATTGGGATAAGGTGAATACTAATCTTGAACACTCCATGGTGTGGGACAAAATTGACCATGGTTCTTTCAGGGTTGATGATGATCTTATGGAAGCTCTCTTCGGGTATGTTGCCACCAAACCAAATGGTAATAATATCCCAAAAGGAAATGACTCAGCAGGTCCAAGCAAGGATGTCTCTGCTCCATCCACAAATGCCTTCCTTCTTGACCCCAGAAAATCACAGAACATTGCTATAGTTTTGAAATCTCTGTCAGTCTCAAGAAAAGAAATTATTGAAGCACTTGTTGATGGTCAAGGCCTTAATACAGATACCATTGAAAAGCTTGCTAGAATAGCACCAACAGAAGAAGAGCAATCCCAAATACTTGAATACAAAGGAGACCCATCAAAACTTGCTGTAGCAGAATCATTCTTGCATCACATCCTCAAAGCTGTTCCTTCAGCATTTAAACGCTTGCATGCCATGCAATTCAGGTTGACCTATGACTCTGAGATTCTAGAAATCAAGGAGTTTCTACAGACCCTTGAGGTGGGGTGTAAGGAGCTTCGAAACCAAGGAGTGTTTGTGAAGCTTCTTGAAGCAGTACTTAAGGCTGGAAATCGCATGAATGCAGGTACTCACAGAGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTAAGGAAGCTCTCTGATGTCAAGAGCATAGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTAGTTCGTTCTGAAGGAAAACGTGCTGTTCTTAACCGCAACCACAGTTTTAGTCGTAGTAGCAGTAGGAACAGCAACAGCATTGAAGATCCTCAGAATTCTGCTGCTTTAAATGAACAAAGACAAAGGGAATATATAACTCTAGGATTACCAATTGTAGGAGGGGTCAGTTCTGAGTTTTCCAATGTAAAGAAAGCAGCACTTACAGATTATAACAGTTTTGTTGGTTCAATCTCAGCACTCTCAGCCAGGATGTTTGAAATTAGGCAACTTATTTCCCAGTGTGGAAATGATAAAGGAGGAAAATTTGTGAGAGAAATGAACCGTTTTCTTGAAACTGCTGAGGAGGAATTGAAATCAGTGAGGGAAGAGCAAACAAGGGTAATGCAGCTTGTGAAGAGAACAACAGATTACTATCAAGGAGCTTCCAAAGATAGTGCAGAACACCCTCTTTATCTGTTTGTCATAGTCAAGGATTTTCTGGGAATGGTTGATCAAGCCTGCATAGAGATTGCTCGTAACATGCAAAAGAAGAAGATACCTAAAGCAAATGCTGGGTGA 2436 0.4191 MALKVMFLLSLVVVLQSFVIPTCHCQISFPPQNIETFYPIETPEPEIPPTQPPEPPPKQPLSPGPGPVAASSSSSSNNKVVTAVAATAASTLIVSGLIFLLVQRCLRTRRRKVMTNTASAAQRPVVPQVSVFERMDGNIKGLIVDEDGLDVVYWRKLEGKGKNSNKGFQKEVLHSPKNEEDDDHEGKQGKKSESIQEIPLLRGKSSTSQLDIFPEESYTIMRILPPAPPPIVPIASKSVKKPDSPTKPFNLALLPSSPKRPSTSFSSIPKMTTPAPPPPLPTIPDRKSQTPEPPPPPPPPPPIADRKSLASLPPPPPIPARKSPAPPPPPPPISSKKSSAPPPPPPKVGGFKSSSKPPPIPIEKPVSTSKQESSSGEVKLKPLHWDKVNTNLEHSMVWDKIDHGSFRVDDDLMEALFGYVATKPNGNNIPKGNDSAGPSKDVSAPSTNAFLLDPRKSQNIAIVLKSLSVSRKEIIEALVDGQGLNTDTIEKLARIAPTEEEQSQILEYKGDPSKLAVAESFLHHILKAVPSAFKRLHAMQFRLTYDSEILEIKEFLQTLEVGCKELRNQGVFVKLLEAVLKAGNRMNAGTHRGNAQAFNLASLRKLSDVKSIDGKTTLLHFVVEEVVRSEGKRAVLNRNHSFSRSSSRNSNSIEDPQNSAALNEQRQREYITLGLPIVGGVSSEFSNVKKAALTDYNSFVGSISALSARMFEIRQLISQCGNDKGGKFVREMNRFLETAEEELKSVREEQTRVMQLVKRTTDYYQGASKDSAEHPLYLFVIVKDFLGMVDQACIEIARNMQKKKIPKANAG. 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01664 811 MobiDBLite consensus disorder prediction 271 364 - -
Seca9g01664 811 Pfam Formin Homology 2 Domain 374 789 IPR015425 -
Seca9g01664 811 MobiDBLite consensus disorder prediction 234 378 - -
Seca9g01664 811 MobiDBLite consensus disorder prediction 39 74 - -
Seca9g01664 811 MobiDBLite consensus disorder prediction 42 64 - -
Seca9g01664 811 PANTHER FORMIN-RELATED 312 800 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Seca9g01664 811 MobiDBLite consensus disorder prediction 164 192 - -
Seca9g01664 811 MobiDBLite consensus disorder prediction 638 661 - -
Seca9g01664 811 SUPERFAMILY Formin homology 2 domain (FH2 domain) 450 805 - -
Seca9g01664 811 Gene3D Formin, FH2 domain 390 810 IPR042201 -
Seca9g01664 811 MobiDBLite consensus disorder prediction 424 443 - -
Seca9g01664 811 ProSiteProfiles Formin homology-2 (FH2) domain profile. 370 811 IPR015425 -
Seca9g01664 811 SMART it6_source 370 804 IPR015425 -
Seca9g01664 811 MobiDBLite consensus disorder prediction 256 270 - -
Seca9g01664 811 MobiDBLite consensus disorder prediction 426 443 - -
Seca9g01664 811 Coils Coil 729 756 - -
Seca9g01664 811 MobiDBLite consensus disorder prediction 164 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01664 Seca-Chr9 27634348 27636872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01664 9 805 FH2 protein (formin) Gene Family AT1G70140 45.455 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01664 - - gmx:100780368 913.294