Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01650 ATGACGCAGGAAAGTGACGTCACGTCATCATCGTCTCCGGCAGCATCCTTCAGGCTCCGTTGGGACGTGTTCCTGAGTTTCAGGGGCACCGATACGCGTGACACCTTCACAAAGGACCTCTACGAAGCACTCCATGCCAGCGGGGTTCGGGTCTTCCGTGATGATGATGGGTTGGGTCGGGGCGAGGAGATACAAGCGAATCTTCTAGAAGCTATTGAAGACTCTGCAGCCTCTGTTATTGTTCTGTCTCCTGATTATGCCTCTTCACGTTGGTGTCTCGAGGAGTTGGCCAAGATTTGTGACTGTGGAAGGCTCATTCTGCCCGTTTTCTACCGGGTCGACCCGTCTGATGTACGAAAGCAAAAAGGTCCCTTTGAGGAGGCTTTTAGGTCTCATGCAAACAGGTTTCAGGCAGAGAAGGTTCAGCTCTGGAGAGATGCTATGGCAAAAGTCGGTGGAATTGCTGGATGGGTTTTTCAACAAAACAGTGACAGTGATAAGCTCATTAGAGTTTTGGAGGAAACGATTATGAAGCAGATGAGGAATACTCCACTGAGTGTGGCTCAGTATACAGTTGGGCTTGATGATAGGGTTGAAGAGCTGAGAAAGTTGTTTGATGTGAAATCCAATGATGTGAGGGTTTTGGGAATCTATGGGATGGGTGGTATTGGTAAGACAACCCTCGCCAAGAGCCTCTTCAATAGCCTTGTTGTTCATTTTAACCGTCGAAGCTTCATTTCAAGTGTTAGAGAAGTTTCAAAAACTGGTGATGATGGTTTGGTTTCTCTTCAAAACAAAATTTGCAATGATCTTTCCTCTGTTGGAACAATGGATCTTGTCAATGATGTTAATGATGGCATTTCTGCTATTAGAAGAATAGTACAGAAAAATAGAGTTCTGTTAATTCTGGATGATGTTGATGATGTAAAACAGCTTGAATTTTTGATGGGTAAGAGGGAATGGTTTTATAAAGGAAGCCGTGTTGTAATAACCACAAGGGATAAACAAGTTTTACCTGAGAGTTTTGTTGATGTGCACTATGAGGTGCAGGAATTGGAATTCTCTCAAGCACTAGAATTATTCTGTTACCATGCAATGAGAAGGAAGGAACCTGCAGATGGGTTTTTGGATCTGTCAAAACAAATTGTAGAAAAGACAGGGAGATTGCCTCTGGCTTTGGAAGTTTTTGGGTCTTTTCTGTTTGATAAGAGGACAATTAAGGAGTGGAAAGATGCTTTGGAGAGGCTGAAACAGACTCGTCCTGCTTATATTCAGGATGTGTTGAAGATTAGTTTTGATGCGTTAGATGAACAAGAGCAGTGTATATTTCTTGACATTGCTTGTTTGTTTGTGCAGATGAAAATGAAGAGAGATGAAGTGATTGATATATTGAATGGTTGTAAGTTTAATGGAGAGATAGCAATAGCAGTTCTCATTGGAAGAAGTTTAATTAAAATAAATAAGGATAATGTATTGTGGATGCATGATCTAGTTAGAGATATGGGAAGGCAAATTGTTCAAAATGAAAGCCTTACAGATTATGGTCAACGTAGCAGGCTGTGGGATCGTGACCAAATCTTGACTGTCTTGAAGAGTAAGAAGGGAACAAGAAGTGTTCAAGGGATTGTCCTAGATTGTGTAAAGAGAAGCAAGTTAATTCTTAGAGATCGCCGTGCTGATGAAATTACTTGGGACAACTTTCGCCAAAAGCCCAGTTGTAAATCTGCATCAGCATGTATAAAAGAGAGGTATAAAAAGTATTTGAGGGATAGAGAAGAGAAAGCAAAAGAGTTTACACTTCAGACAAAGCACTTTAAACCAATGGTTTCCTTAAGATTGCTTCAAATTAATTATTCGAAATTGGAAGGAAAATTTAGTCTTCCTCCAGGACTGAAGTGGTTACAATGGAAAGGATGCCCATTAAGGCACATGCCTTCAAGCTTTAATCCTTTGGAGCTTGCTGTGCTTGATCTCTCAGAAAGTAAGATTGAAACACTGTGGGGCAGGCGCAGCAACAAGGTGGCTGAGAACTTGATGGTTTTAAACCTATCCAGTTGCTACAAATTGACAGAAATTCCTGATTTAACTGGGTATCTATCCCTGAAAAAAGTTGTTTTGGAAGATTGCACTAATTTATCTAGGATTCATGAATCACTTGGAAATCTAAGTACCTTGGTTCACTTGAACTTGCGGAGCTGCCATAACCTTATGGAATTACCCGGTGATGTCTCTGGGCTGAAAAATCTCGAGAACCTTATTCTTTCTGACTGCTGGAAATTAAAAGCATTACCTACAGACCTAAGCTGCATGGTTTCTTTAAGACAACTTCTTCTTGATAAAACTGCTATAACTGAGCTACCTGAGTCCATCTTCCACCTCACAAAACTTGAAAAGTTGAATGCAAGTGAATGTCAGTTTTTGAAGAGGTTACCTACCTGCATTGGGAAACTGAGCTCACTGCAAGAATTGACCCTGAACCATACAGCATTGGAGGAATTGCCCGATTCTGTAGGTTCTTTGGAAAACCTTGAGATGCTTGGTTTAGTGGGATGTAAGTCACTCTCTGTGATTCCTAACTCTGTTGGGAAACTTACTTCATTGAAAAAATTATCTTTTGATGTCAGTGGAATTAAAGAATTGCCTGCTTCTATTGGTTCTTTAACATATTTAAGGGAACTTTCTTTTGGTGGCTGTACTTTTATTAACGAATTACCTGTGTCAATAGAAGCGTTAGTTTCAATTTTTGAGCTTCAGTTAGATGGGACATCAATTTCCATTTTGCCAGATCAAATTGGAGCCATGAAAATGCTAAAAAAGCTTGAGATGGGAAGATGTCAGCATCTCAAGTTCCTTCCAGCATCAATTGGCAGTTTGTCAGCTCTTACTACTTTGGACATGAATAACACTAACATTACTGAACTGCCAGAGTCAATAGGAATGTTGGAAAACCTTGTCAGGTTGAGATTAGACATGTGCAAACAGCTCCAAAGGCTTCCAGCCTCCATTGGAAAGTTGAAATCCTTGCAAGGGTTATTTATGAAGGAAACAGCAGTTACCCACCTACCTGAAAGCTTTGGGAAGCTTTCAAGCCTGGTAGAACTAGACATGGAAAGAAGACCTTATCTTAATATGGTTGGAACTAACAGACAAGAAGAACCTAATTCAGAGACAATCTTAACTTCTTTTTGTAATCTAACCTTGCTGGAACAGCTAAATGTTCATGGATGGAGAATAGTTGGAAAAATTCCAGATGATTTTGAGAAGCTATCATCACTAGAAACTTTAAGTTTAGGCCACAACAATATTTGCAGTCTTCCAGCAAGCATGGCAGGCCTTTCCTATCTCAAAAAGCTTTTGTTATCAGATTGCAGGGAGCTCATGTTTCTGCCTCCTCTTCCCTCTAGCTTAGAGGAGCTTAATATTGCAAATTGTACAGAAGTTGAGTACATATCTGATATTTCAAACTTGGACAGATTAGAAGAGTTCAACCTTACAAATTGTGAAAAGGTGGAGGATATACAGGGTCTTGAACATCTGAAGTCCTTAAGAAGGTTGTACATGAATGGTTGCATTGGATGCTCCCTTGCCGTAAAGAGGAGATTCTCCAAGGTTCTACTTAAAAAATTGGAGATTTTGATTATGCCTGGAAACAGAGTTCCAGATTGGTTTTCAGGAGAATCAGTTGTCTTTTCCAAGCGAAGAAATCGTGAGCTTAAAAGTATTATTTGTGTTGGTGTGCTCTCTTTCAACAATATACCTGAAAACCAAAGAGATAAACTGCAGTTAGTGGATGTTCAGGGAAAAATCTTCAATTTGACTGATAATGTTTATAGCACAACGTTTCGCTTGCTTGGAGTACCTAGGACAAATGAAGACCATGTTTTTTTGCGCAGATTTGGAGTTCATTCTTCCTTAGTTTCTCAATTAAAAGATAAGTATACCTTACGTTTGACAAAGCGAAACCCACCGCGTGTTGAGGAGCTGGAGCTGAAGAGTTGTGGGATTTGTTTAGTTTTTGAAGGTGATGATGATTATGAGGGAGATGAAGGATCACTAAACGAAAGTCAATACTCTGTTTCACAAAAAATGGCTAAGTTCTTCAATTCCATTGCAGAAGATGACCTGTGTGTGTGA 4134 0.4003 MTQESDVTSSSSPAASFRLRWDVFLSFRGTDTRDTFTKDLYEALHASGVRVFRDDDGLGRGEEIQANLLEAIEDSAASVIVLSPDYASSRWCLEELAKICDCGRLILPVFYRVDPSDVRKQKGPFEEAFRSHANRFQAEKVQLWRDAMAKVGGIAGWVFQQNSDSDKLIRVLEETIMKQMRNTPLSVAQYTVGLDDRVEELRKLFDVKSNDVRVLGIYGMGGIGKTTLAKSLFNSLVVHFNRRSFISSVREVSKTGDDGLVSLQNKICNDLSSVGTMDLVNDVNDGISAIRRIVQKNRVLLILDDVDDVKQLEFLMGKREWFYKGSRVVITTRDKQVLPESFVDVHYEVQELEFSQALELFCYHAMRRKEPADGFLDLSKQIVEKTGRLPLALEVFGSFLFDKRTIKEWKDALERLKQTRPAYIQDVLKISFDALDEQEQCIFLDIACLFVQMKMKRDEVIDILNGCKFNGEIAIAVLIGRSLIKINKDNVLWMHDLVRDMGRQIVQNESLTDYGQRSRLWDRDQILTVLKSKKGTRSVQGIVLDCVKRSKLILRDRRADEITWDNFRQKPSCKSASACIKERYKKYLRDREEKAKEFTLQTKHFKPMVSLRLLQINYSKLEGKFSLPPGLKWLQWKGCPLRHMPSSFNPLELAVLDLSESKIETLWGRRSNKVAENLMVLNLSSCYKLTEIPDLTGYLSLKKVVLEDCTNLSRIHESLGNLSTLVHLNLRSCHNLMELPGDVSGLKNLENLILSDCWKLKALPTDLSCMVSLRQLLLDKTAITELPESIFHLTKLEKLNASECQFLKRLPTCIGKLSSLQELTLNHTALEELPDSVGSLENLEMLGLVGCKSLSVIPNSVGKLTSLKKLSFDVSGIKELPASIGSLTYLRELSFGGCTFINELPVSIEALVSIFELQLDGTSISILPDQIGAMKMLKKLEMGRCQHLKFLPASIGSLSALTTLDMNNTNITELPESIGMLENLVRLRLDMCKQLQRLPASIGKLKSLQGLFMKETAVTHLPESFGKLSSLVELDMERRPYLNMVGTNRQEEPNSETILTSFCNLTLLEQLNVHGWRIVGKIPDDFEKLSSLETLSLGHNNICSLPASMAGLSYLKKLLLSDCRELMFLPPLPSSLEELNIANCTEVEYISDISNLDRLEEFNLTNCEKVEDIQGLEHLKSLRRLYMNGCIGCSLAVKRRFSKVLLKKLEILIMPGNRVPDWFSGESVVFSKRRNRELKSIICVGVLSFNNIPENQRDKLQLVDVQGKIFNLTDNVYSTTFRLLGVPRTNEDHVFLRRFGVHSSLVSQLKDKYTLRLTKRNPPRVEELELKSCGICLVFEGDDDYEGDEGSLNESQYSVSQKMAKFFNSIAEDDLCV. 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01650 1377 Gene3D Ribonuclease Inhibitor 586 739 IPR032675 -
Seca9g01650 1377 Gene3D Ribonuclease Inhibitor 1045 1275 IPR032675 -
Seca9g01650 1377 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 182 - -
Seca9g01650 1377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 446 IPR027417 -
Seca9g01650 1377 Gene3D - 352 436 IPR042197 -
Seca9g01650 1377 Gene3D Ribonuclease Inhibitor 740 872 IPR032675 -
Seca9g01650 1377 Gene3D Ribonuclease Inhibitor 873 1044 IPR032675 -
Seca9g01650 1377 Gene3D - 19 179 IPR035897 -
Seca9g01650 1377 SUPERFAMILY L domain-like 493 944 - -
Seca9g01650 1377 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 821 IPR044974 GO:0006952
Seca9g01650 1377 ProSiteProfiles TIR domain profile. 19 172 IPR000157 GO:0007165
Seca9g01650 1377 Gene3D - 180 345 IPR027417 -
Seca9g01650 1377 PRINTS Disease resistance protein signature 293 307 - -
Seca9g01650 1377 PRINTS Disease resistance protein signature 838 854 - -
Seca9g01650 1377 PRINTS Disease resistance protein signature 386 400 - -
Seca9g01650 1377 PRINTS Disease resistance protein signature 214 229 - -
Seca9g01650 1377 Coils Coil 1377 1377 - -
Seca9g01650 1377 SMART till_3 20 154 IPR000157 GO:0007165
Seca9g01650 1377 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 157 IPR035897 -
Seca9g01650 1377 SMART LRR_typ_2 864 887 IPR003591 -
Seca9g01650 1377 SMART LRR_typ_2 770 793 IPR003591 -
Seca9g01650 1377 SMART LRR_typ_2 911 934 IPR003591 -
Seca9g01650 1377 SMART LRR_typ_2 817 840 IPR003591 -
Seca9g01650 1377 SMART LRR_typ_2 1089 1112 IPR003591 -
Seca9g01650 1377 SMART LRR_typ_2 958 981 IPR003591 -
Seca9g01650 1377 SMART LRR_typ_2 1005 1028 IPR003591 -
Seca9g01650 1377 Pfam TIR domain 21 184 IPR000157 GO:0007165
Seca9g01650 1377 Pfam NB-ARC domain 199 426 IPR002182 GO:0043531
Seca9g01650 1377 ProSiteProfiles Leucine-rich repeat profile. 1091 1113 IPR001611 GO:0005515
Seca9g01650 1377 SUPERFAMILY L domain-like 911 1244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01650 Seca-Chr9 27441488 27448442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01650 7 895 WRKY Transcription Factor Family AT4G12020 28.587 1.05e-85 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01650 - - gmx:100784137 2058.88