Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01649 ATGAACCAGCGCATCCCTTCCTCTCGAACGGTTCGGCTCGGCCGAGTCCAGCCCCAGGCCCCTGGTTACCGCACCATCTTCTGCAACGATCGCCAGGCCAATCTTCCCGTCCGATTCAGGGGGAATTCAATATCGACTACAAAGTACAACGTTTTCACTTTTTTCCCAAAAGGATTGTTTGAACAGTTCAGGCGGGTTGCTAATCTCTACTTTCTTACAATCTCAATTTTGTCTACCACACCAATCAGCCCTGTGTCTCCAATAACTAATGTGCTTCCTCTATCTCTGGTGCTTCTCCTCTCTCTCATTAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAAAATGACATGGCCATAAACAATAATATGATTGATGTTTTGCAAGATCAAGAGTGGGTGTCTATACCCTGGAAAAAGTTGCAAGTCGGGGACATTGTCAAGGTTAATCAGGATGGATTCTTTCCTGCAGATCTGCTTTTCCTGGCTAGTACAAATGTAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGCGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTACCTGACTCCAGAGCAGGCATCTGAGTTTAAAGGTGAAATTCAGTGTGAACAACCAAACAATTCACTGTATACCTTCACTGGAAATCTTATAATTGAAAACCAAACACTTCCTGTCAGTCCAAATCAACTTTTGTTGCGAGGGTGCAGTCTGAGGAATACAGCATATATTGTTGGGGTTGTTATTTTTACAGGACATGAGACAAAGGTGATGATGAATGCTATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTGGACAAACTCATACTCACTCTATTTGCCACTCTCTTTGTGATGTGTTTTATTGGAGCCGTAGGCAGTTCTATCTTTGTTAACAAGAAGTATTTCTATTTACATCTTGAATCATCAGAGAAGGGCTCAGCACAGTTCAACCCAAGAAACCGATTTTTTGTTTTCCTTCTGACTATGTTTACCCTCATCACTTTATACTCAACAATCATCCCCATTTCACTTTATGTGTCAATAGAGATGATCAAATTTATTCAATCCACTCAATTTATCAACAAGGACTTGCACATGTACCATTATGAAACCAATACCCCAGCATTGGCCAGAACTTCAAATCTGAATGAAGAACTTGGGCAGGTGGAATACATCTTCTCAGACAAAACTGGGACTCTGACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATTGGAGGAGAGGTCTATGGAAATGGTGTGACTGAAATTGAGAAGGGAGCAGCAGAGCGTAGCGGCATAAAACTTGAGGAAAATATCTCACCCAATGCAGTGCGAGAGAGGGGTTTTAATTTTGATGATGCCAGGCTTATGAGAGGAGCTTGGAGGAATGAGTCGGATCCTGATAGCTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTGCTTCCCGAGGGTGATGAGTCCCCTGAGAAGATCAGATATCAAGCTGCATCACCTGATGAGGCTGCTTTGGTTATAGCTGCAAAGAACTTTGGTTTTTTCTTTTACAGACGCACACCTACGATGATATATATTCGTGAATCTCATGTTGAGAAGATGGGTAAAATTCAAGATGTATCTTATGAGATTTTGAGTGTGCTTGAGTTTAATAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGTTTTCCAGATGGGAGGCTTGTATTGTACTGCAAGGGTGCTGATACTGTAATCTATGAAAGATTAGCTGATGGTTATAATGATATTAAAAAAGTGACTAGGGAGCATTTGGAACTATTTGGATCTGCTGGACTCCGCACATTATGCCTGGCGTACAAAGAATTACATCCTGATGTATATGAAAACTGGAATGAGAAGTTCATCCAGGCCAAATCTTCTCTACGTGATCGGGAAAAGAAGTTAGATGAGGTGGCAGAACTTATAGAAAATGATCTCATTTTGATTGGTAGCACTGCCATAGAAGACAAGCTTCAAGATGGAGTACCAGCCTGCATAGATACTCTACAAAGAGCTGGCATTAAAATTTGGGTACTTACAGGGGACAAGATTGAAACAGCAATTAATATTGCTTATGCATGCAATTTAATAAACAATGAGATGAAGCAATTTATGATCAGTTCAGAAACTGATGCAATTAGAGAAGTGGAAGAGAGGGGAAACCAAGTAGAAATTGCACAATTTATGAAAGAAGAAGTGAGGAAAGAACTTAAGAAGTGCCTTGAGGAAGCACGGAGCTATTTTAGCTCTGCATCTGGACCAAAATTAGCCCTTGTAATTGATGGAAAGTGTCTAATGTATGCATTGGATCCAAGTTTGAGAGTCATGCTTCTGAATGTGAGTTTGAATTGTCATGCTGTTGTTTGCTGCCGAGTTTCTCCTTTACAGAAAGCACAGGTCACAAGTTTGGTCAAGAAAGGTGCAAGGAAAATAACACTTAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCAGCTCACGTTGGTGTTGGGATAAGTGGGTTGGAGGGAATGCAAGCCGTGATGGCTAGTGATTTTGCCATTGCACAGTTTCGTTACCTTGCAGATTTGCTTCTTGTTCATGGCCGGTGGTCATATCTTCGAATATGCAAGGTGGTGTTATACTTCTTTTACAAGAACCTCACGTTCACTCTTACTCAGTTTTGGTTTACCTTTCAAACTGGGTTTTCTGGCCAGAGATTTTATGATGATTGGTTTCAGTCATTGTATAATGTTATCTTCACTGCACTGCCTGTGATAGTTGTTGGACTATTTGACAAGGATGTCAGTGCATCTCTATCCAAGAAGTATCCTGAACTATACGGGGAGGGAATAAGAAATGTCTTTTTCAAATGGGAAATTGTGGCTATATGGGCCTTTTCTTCTGTCTACCAGTCTTTAATATTCTTCTATTTCGTGAGTTCGTCAAGTTTAAGTGCTAAAAATTCAGCAGGCAAGATATTTGGACTCTGGGATGTCAGTACAATGGCCTTCACATGTATTGTAATAACTGTCAACTTGCGACTTCTTATGGTCTGTAATTCAATCACAAGATGGCACTATATTGGTGTTGGTGGAAGTATATTAGCATGGTTTATTTTTGTTTTTATATATTCAGGGATCAGCACTCCATATGATCGACAGGAGAATATATATTTTGTAATATATGTCTTGATGAGTACATTATATTTCTACCTCACGCTAATTCTTGTCCCTGTTGCGGCACTTTTCTGTGACTTTGTTTACCAAGGGGTTCAGAGATGGTTCTTCCCTTATGATTATCAGATTATTCAAGAAATGCATAAGCATGAGAATGATGACACCAGCAGGGCACAACTGCTAGAGATAGGGAACCAGCTTACTCCCTCTGAGGCAAGGAGCTATGCCATATCTCAACTCCCACGTGAGATATCAAAGCATACCGGGTTTGCTTTTGATTCACCTGGTTATGAATCATTTTTTGCTGCACAGCTTGGTGTATATGCCCCACAAAGGGCATGGGATGTTGCAAGACGAGCTAGCATGAGATCTCGACCAAAGATTGGACAGAAAAAATAA 3624 0.4073 MNQRIPSSRTVRLGRVQPQAPGYRTIFCNDRQANLPVRFRGNSISTTKYNVFTFFPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSLVLLLSLIKEAFEDWKRFQNDMAINNNMIDVLQDQEWVSIPWKKLQVGDIVKVNQDGFFPADLLFLASTNVDGVCYIETANLDGETNLKIRKALEKTWDYLTPEQASEFKGEIQCEQPNNSLYTFTGNLIIENQTLPVSPNQLLLRGCSLRNTAYIVGVVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILTLFATLFVMCFIGAVGSSIFVNKKYFYLHLESSEKGSAQFNPRNRFFVFLLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLHMYHYETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIEKGAAERSGIKLEENISPNAVRERGFNFDDARLMRGAWRNESDPDSCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKNFGFFFYRRTPTMIYIRESHVEKMGKIQDVSYEILSVLEFNSTRKRQSVVCRFPDGRLVLYCKGADTVIYERLADGYNDIKKVTREHLELFGSAGLRTLCLAYKELHPDVYENWNEKFIQAKSSLRDREKKLDEVAELIENDLILIGSTAIEDKLQDGVPACIDTLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFMISSETDAIREVEERGNQVEIAQFMKEEVRKELKKCLEEARSYFSSASGPKLALVIDGKCLMYALDPSLRVMLLNVSLNCHAVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIVVGLFDKDVSASLSKKYPELYGEGIRNVFFKWEIVAIWAFSSVYQSLIFFYFVSSSSLSAKNSAGKIFGLWDVSTMAFTCIVITVNLRLLMVCNSITRWHYIGVGGSILAWFIFVFIYSGISTPYDRQENIYFVIYVLMSTLYFYLTLILVPVAALFCDFVYQGVQRWFFPYDYQIIQEMHKHENDDTSRAQLLEIGNQLTPSEARSYAISQLPREISKHTGFAFDSPGYESFFAAQLGVYAPQRAWDVARRASMRSRPKIGQKK. 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01649 1207 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 23 1162 - -
Seca9g01649 1207 Pfam Phospholipid-translocating P-type ATPase C-terminal 863 1113 IPR032630 -
Seca9g01649 1207 PRINTS P-type cation-transporting ATPase superfamily signature 835 854 - -
Seca9g01649 1207 PRINTS P-type cation-transporting ATPase superfamily signature 404 418 - -
Seca9g01649 1207 Pfam E1-E2 ATPase 121 360 - -
Seca9g01649 1207 FunFam Phospholipid-transporting ATPase 668 875 - -
Seca9g01649 1207 Gene3D - 531 667 IPR023299 GO:0000166
Seca9g01649 1207 SUPERFAMILY Calcium ATPase, transduction domain A 121 265 IPR008250 -
Seca9g01649 1207 FunFam Phospholipid-transporting ATPase 512 667 - -
Seca9g01649 1207 SFLD p-type atpase 386 886 IPR044492 -
Seca9g01649 1207 CDD P-type_ATPase_APLT_Dnf-like 41 995 - -
Seca9g01649 1207 NCBIfam phospholipid-translocating P-type ATPase 39 1121 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Seca9g01649 1207 FunFam Phospholipid-transporting ATPase 100 269 - -
Seca9g01649 1207 Pfam Cation transport ATPase (P-type) 501 595 - -
Seca9g01649 1207 SUPERFAMILY Calcium ATPase, transmembrane domain M 37 1113 IPR023298 -
Seca9g01649 1207 SFLD C1.7: P-type atpase like 386 886 - -
Seca9g01649 1207 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 411 673 IPR023299 GO:0000166
Seca9g01649 1207 ProSitePatterns E1-E2 ATPases phosphorylation site. 406 412 IPR018303 -
Seca9g01649 1207 Gene3D - 668 875 IPR023214 -
Seca9g01649 1207 SUPERFAMILY HAD-like 392 877 IPR036412 -
Seca9g01649 1207 Gene3D - 104 269 - -
Seca9g01649 1207 NCBIfam HAD-IC family P-type ATPase 808 914 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca9g01649 1207 FunFam Phospholipid-transporting ATPase IC 401 413 - -
Seca9g01649 1207 Pfam Phospholipid-translocating ATPase N-terminal 26 90 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01649 Seca-Chr9 27401922 27424856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01649 2 1206 Primary Pumps ATPases AT1G59820 79.519 0.0 2061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01649 K14802 - gmx:100815547 2207.18