Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01630 ATGGCTAGAAATGATTTGAAGCTTTTGGGAGGTTGGTTCAGTCCATTTCCAGTGAAGGTGCATATTGCCCTTAACATCAAAGGTTTGGAATATGAGCTAGTTGAAGAGACCTTGAATCCCAAAAGTGACCTGCTTCTTCAGTCCAATCCTGTGTACAAGAAAATCCCAGTTCTAATCCATGGAGATAAACCCATCTGTGAATCTGGGAACATAGTTGAGTATATTGATGAGGTTTGGACCAATGCTCCTTCTATCCTCCCAACTAATGCTTATGACCGAGCTGAAGCTCGATTTTGGGCTGCCTACATTGATGACAAGTGGGCTCCGCCCATTGAAACTATTCTATTTGCTAAAGATGATGAAACAAAGAAGGCAAACTTTGAGCAAATTGAAGAAGGACTTGTGAGGTTGGAAGAAGTGTTCAACAAGTGCAGTCAAGGAAAGGCCTTTTTTGGAGGAGATAAGATTGGATTCATTGATATTACTTTTGGGTGCTATTTGAGCTGGATCAGAGTCACAGAGAAGATGAATGGAAAGAAGGTGCTTGATGAATCAAAGACTCGTGCTTTGGTGAAATGGGCTGAGGCATTTGCTGCTGATCCTGCTGTCAAGGGACATCTACCAGAGATTGACAAGCTTATTGGGTATGCCAAGTTTGTACAGCAAAAAAGAGCTGCTGCTAATGCTACTCCCAATTAA 699 0.4206 MARNDLKLLGGWFSPFPVKVHIALNIKGLEYELVEETLNPKSDLLLQSNPVYKKIPVLIHGDKPICESGNIVEYIDEVWTNAPSILPTNAYDRAEARFWAAYIDDKWAPPIETILFAKDDETKKANFEQIEEGLVRLEEVFNKCSQGKAFFGGDKIGFIDITFGCYLSWIRVTEKMNGKKVLDESKTRALVKWAEAFAADPAVKGHLPEIDKLIGYAKFVQQKRAAANATPN. 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01630 232 Gene3D Glutaredoxin 1 85 - -
Seca9g01630 232 Gene3D - 86 229 - -
Seca9g01630 232 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 212 IPR045073 -
Seca9g01630 232 SFLD Glutathione Transferase (cytosolic) 2 227 IPR040079 -
Seca9g01630 232 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Seca9g01630 232 FunFam Glutathione S-transferase GSTU6 1 86 - -
Seca9g01630 232 CDD GST_C_Tau 90 219 IPR045074 GO:0004364|GO:0006749
Seca9g01630 232 FunFam Glutathione S-transferase U9 86 227 - -
Seca9g01630 232 SFLD Main.3: Omega- and Tau-like 2 227 IPR045073 -
Seca9g01630 232 CDD GST_N_Tau 6 79 - -
Seca9g01630 232 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Seca9g01630 232 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Seca9g01630 232 SUPERFAMILY GST C-terminal domain-like 85 219 IPR036282 -
Seca9g01630 232 Pfam Glutathione S-transferase, C-terminal domain 98 201 IPR004046 -
Seca9g01630 232 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 226 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01630 Seca-Chr9 27147606 27148551 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01630 1 226 Glutathione S-transferase Gene Family AT1G10360 55.507 1.49e-86 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01630 K00799 - gmx:547576 333.569