Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01627 ATGACTCTTCCTTCACCCACTCCCTCTCTACCTCATCCATGTCTCCACCACATCCCTCTCTCCTTCATTCTGCTACTGTTTTCCACCACATCTGCTCACACATGCTCTTCCAATCCAAACTCCTCCACCACATACCCTTGCCCACCATTCCCTTCCAACCCCCCTTTCCCATTCTCTTCTTCACCAGGTTGCGGCCACCCTTCTTTCCAGCTAAACTGCTCCACTCCTCACTCTACCATCTCCATTAACAACCTCACTTTCTCCATCCTCACTTACAAGCCCAACACTTCCTCCATTTTCCTCTCCCCTTACCACCCCATTCCCCAAAACAACTCACACCACACTTGCCCTGCTTCCTCCTCAGACTTCCCTTCCATCCCCATTCGATCCATCAATCTCTCTGGCTCCCCTTTCCGTGTCTCAGATGCTTCATGCTCTCGCCTCTCTTTCCTCCAACCATGCTCCCCTCCAACTCTGCCAAATTGCAGCCACTGCCCCTGGGAATGCAAGCTCATCAAGAACCCTGGTGAGGTCCTCCAAGACTGCAGATCTATGCACCACTCTGCTTCTGACTCTGAACATAGCTGCCAACGTGATGTCCTTGGCTTCCTCAACGAATTTCTCGCTACTATAGGGATCGAGGTTGAGTGGGACGAAACACAAGACCCTTACTTCTCAAAATGCAAAGATTGTCAAGCCAACAAAGGATTCTGTGGCTTCAATTCATCAGACCCAGAGAAGCAATTCCTCTGCTTCCGCTCCAAATCAACCCTCTCACCACCTTGGATTCACAACGTCAAGCCAAACAGGACAACGATGTTCAGCCTCATCATCGCATTGACTTCATTGCTGCTCTTCCTCTCAGTAGCCACCGCCATTCTCCGCTCCAGAAGCTCCAAGCTGCCACGCACGGCGGAGGAAGACCCTACCACCGTCTTCCTCCACAACCAACGCTCCGCGAGCCTTCTCCCTCCGGTGTTCACCTACGAAGAGCTCGACTCTTCCACCAACCACTTCGACCCCAAGCGGAAAATCGGCGACGGCGGATTCGGCACCGTCTATCTCGGCCACCTCCGTGACGGAAGACTCGCGGCGGTGAAGCATCTCCACCGGCACCACAGCACCACGGCGTTTTCCACCAAGTCGTTCTGCAACGAGATCCTGATTCTCTCCTCCATCGACCACCCTAACCTCGTGAAGCTTCACGGCTATTGCAGTGATCCGAGAGGGTTGATCCTCGTTTACGATTACGTCCCAAACGGAACCCTAGCGGATCACCTTCACGGCCCCAAGAAAGGTTCCTCGCTGACGTGGCAAACGAGGCTCGAAATCGCGCTTCAAACGGCGTTAGCGATGGAGTATCTTCACTTCTCAGTGGTGCCGCCGATAGTGCACAGAGACATAACCTCTTCCAATATCTTCATTGAAAAGGACATGAGGATCAAAGTGGGTGATTTTGGGCTCTCAAGGCTGTTAGTTTTGCAGGATACGACGTCGTCTTCGAACGGGTACGTTTGGACGGGTCCCCAGGGTACTCCCGGGTATTTGGATCCGGATTATCACCGGTCATTCCGGTTAACCGAGAAGAGTGACGTGTACAGCTTCGGGGTGGTGCTATTGGAGCTTATATCGGGACTCAGGGCGGTGGACCAGACTAGGGACAAGCGCGAGATGGCACTCGCTGACATGGTTGTGTCGAGGATCCATGCGGGGCAGCTCCACCAGGTTCTCGACCCGGTTCTTGGTTTGGACGGCGACGGCGCCGTGGCTGCGGTGGCGGAGCTAGCTTTCCGGTGTGTTGCTCCGGATAAGGATGACCGACCCGATTCGAAGGAGGTTGTGGAGGAGCTGAAGCGGGTACGGAGCCGGGTGCGTGGTGGATTGCGGACGTCGGTGAGTTGTAACGGCGGCGGTGAGGTGGCGAAGGAGTGA 1932 0.5466 MTLPSPTPSLPHPCLHHIPLSFILLLFSTTSAHTCSSNPNSSTTYPCPPFPSNPPFPFSSSPGCGHPSFQLNCSTPHSTISINNLTFSILTYKPNTSSIFLSPYHPIPQNNSHHTCPASSSDFPSIPIRSINLSGSPFRVSDASCSRLSFLQPCSPPTLPNCSHCPWECKLIKNPGEVLQDCRSMHHSASDSEHSCQRDVLGFLNEFLATIGIEVEWDETQDPYFSKCKDCQANKGFCGFNSSDPEKQFLCFRSKSTLSPPWIHNVKPNRTTMFSLIIALTSLLLFLSVATAILRSRSSKLPRTAEEDPTTVFLHNQRSASLLPPVFTYEELDSSTNHFDPKRKIGDGGFGTVYLGHLRDGRLAAVKHLHRHHSTTAFSTKSFCNEILILSSIDHPNLVKLHGYCSDPRGLILVYDYVPNGTLADHLHGPKKGSSLTWQTRLEIALQTALAMEYLHFSVVPPIVHRDITSSNIFIEKDMRIKVGDFGLSRLLVLQDTTSSSNGYVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLRAVDQTRDKREMALADMVVSRIHAGQLHQVLDPVLGLDGDGAVAAVAELAFRCVAPDKDDRPDSKEVVEELKRVRSRVRGGLRTSVSCNGGGEVAKE. 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01627 643 ProSiteProfiles Protein kinase domain profile. 339 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01627 643 Gene3D Transferase(Phosphotransferase) domain 1 418 629 - -
Seca9g01627 643 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Seca9g01627 643 SUPERFAMILY Protein kinase-like (PK-like) 320 617 IPR011009 -
Seca9g01627 643 Pfam Protein tyrosine and serine/threonine kinase 342 617 IPR001245 GO:0004672|GO:0006468
Seca9g01627 643 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 624 IPR044652 GO:0004672
Seca9g01627 643 ProSitePatterns Tyrosine protein kinases specific active-site signature. 463 475 IPR008266 GO:0004672|GO:0006468
Seca9g01627 643 FunFam Putative serine/threonine-protein kinase At1g18390 family 315 417 - -
Seca9g01627 643 CDD STKc_IRAK 345 619 - -
Seca9g01627 643 Gene3D Phosphorylase Kinase; domain 1 314 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01627 Seca-Chr9 27116703 27118634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01627 20 625 Receptor kinase-like Gene Family AT1G69910 63.955 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Seca9g01627 PK_Tyr_Ser-Thr 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01627 - - pcin:129299787 840.491