Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01621 ATGGGTTCTGGGGACTACTACAAGATACTAAAGGTGAACCGTGATGCCACCGATGAGGACCTGAAGAAGGCTTATAAAAGGTTGGCCATGAAATGGCACCCTGATAAGAACCATCAATACCCTCTTAGGAAAGAAGAGTTTGAAGCCAAGTTCAAGCAGATATCTGAGGCTTATGATGTGCTCATTGACCCCAAGAAGCGCCGGATCTATGACCTCTACGGTCACTATCCCCTTAATCGCTTCACAAAGGAAAATGATGATGGCGATGTTGGGAATAATCTGAAGGAAGATAAAGCAACAGGGGTGATTGAAAGCAGGTTAACATGTACCCTTGAGGAGCTTTACAAAGGTTGCAGAAGGAAATTGAAAATCTCAAGGACTGTTCCTGATGAATTTGGAGAGAATTGA 408 0.4363 MGSGDYYKILKVNRDATDEDLKKAYKRLAMKWHPDKNHQYPLRKEEFEAKFKQISEAYDVLIDPKKRRIYDLYGHYPLNRFTKENDDGDVGNNLKEDKATGVIESRLTCTLEELYKGCRRKLKISRTVPDEFGEN. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01621 135 PRINTS DnaJ domain signature 25 40 IPR001623 -
Seca9g01621 135 PRINTS DnaJ domain signature 46 66 IPR001623 -
Seca9g01621 135 PRINTS DnaJ domain signature 66 85 IPR001623 -
Seca9g01621 135 PRINTS DnaJ domain signature 7 25 IPR001623 -
Seca9g01621 135 Gene3D - 101 135 - -
Seca9g01621 135 Gene3D DnaJ domain 2 94 IPR036869 -
Seca9g01621 135 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 131 - -
Seca9g01621 135 SUPERFAMILY Chaperone J-domain 3 82 IPR036869 -
Seca9g01621 135 CDD DnaJ 5 63 IPR001623 -
Seca9g01621 135 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Seca9g01621 135 SMART dnaj_3 4 66 IPR001623 -
Seca9g01621 135 ProSiteProfiles dnaJ domain profile. 5 74 IPR001623 -
Seca9g01621 135 Pfam DnaJ domain 5 71 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01621 Seca-Chr9 27075178 27077520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01621 6 73 C2H2 Transcription Factor Family AT1G74250 34.783 2.56e-10 55.1