Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01600 ATGGAGAAAGAAGAGAAAAGGTATGAGCTTGGTCGCCAGCCAGCAAACACCAAGTTATCAAGCAACAAGACAGTTAGGAGGATTCGTGTTAGAGGTGGCAATGTGAAATGGAGGGCATTGAGATTGGATACTGGAAATTACTCATGGGGTAGTGAAGCTGTAACTCGCAAGACTCGTATTCTAGATGTGGTTTACAATGCCTCAAACAATGAGCTTGTGCGAACTCAAACCCTGGTCAAGAGTGCTATTGTCCAGGTTGATGCTGCCCCATTCAAACAGTGGTACCTTCATCACTATGGTGTTGATATTGGTAGAAAAAAGAAAGCAGCATCCAAGAAGGACTCTACAGAGGTGATTGTTGATGCTTTGAGAAATTTTTCTTTATTTTTCAATTTCTATCCTGTGATATATCTCTATGCTTCCATTTATTTCTTAAAAAATATATATCTCTATGCTTCCATTTATTTCTTAAAAAATAGCTCTTGTACTTAA 492 0.3841 MEKEEKRYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLHHYGVDIGRKKKAASKKDSTEVIVDALRNFSLFFNFYPVIYLYASIYFLKNIYLYASIYFLKNSSCT. 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01600 163 CDD Ribosomal_S8e_like 6 105 - -
Seca9g01600 163 NCBIfam ribosomal protein eS8 3 89 IPR001047 GO:0003735|GO:0005840|GO:0006412
Seca9g01600 163 FunFam 40S ribosomal protein S8 13 125 - -
Seca9g01600 163 Gene3D - 13 123 - -
Seca9g01600 163 Pfam Ribosomal protein S8e 4 92 IPR022309 -
Seca9g01600 163 PANTHER 40S RIBOSOMAL PROTEIN S8 4 115 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01600 Seca-Chr9 26859039 26861239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01600 1 111 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 88.288 8.86e-69 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01600 K02995 - jre:108996677 219.164