Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01599 ATGTTGAACTTACAGGAGGGTGGTGAAGCTGCTGCTGAAGAAACTAAGAAAAGTAATCATGTTCAGAGAAAACTTGAGAAGCGCCAGAAAGACCGTAAGCTTGATCCTCACATTGAAGAGCAGTTTGGTGGTGGTCGATTGCTGGCCTGTATTTCTTCTCGCCCTGGTCAATGTGGTCGGGCTGATGGGTATGCTTAA 198 0.4646 MLNLQEGGEAAAEETKKSNHVQRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYA. 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01599 65 PANTHER 40S RIBOSOMAL PROTEIN S8 9 64 IPR001047 GO:0003735|GO:0005840|GO:0006412
Seca9g01599 65 Pfam Ribosomal protein S8e 38 64 IPR022309 -
Seca9g01599 65 MobiDBLite consensus disorder prediction 1 39 - -
Seca9g01599 65 Gene3D Ribosomal protein S8e, subdomain 3 45 IPR042563 -
Seca9g01599 65 MobiDBLite consensus disorder prediction 10 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01599 Seca-Chr9 26858534 26858731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01599 5 64 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 71.667 1.34e-26 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01599 K02995 - gmx:100500112 117.857