Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01586 ATGTCAAGGGATTCACTTGTTTTATCAGGGGCTTACAATAATGAAGAAGCTGCTGCAAGAGCTTATGATTTGGCAGCAATTGAACACAGAGGAATAAATGCAGTGACAAGCTTTGACCTAAGGACTTATATCAGAAGCCTAAGACCAAGTGCTCATTCAACTACTTCTCAAGAACAAAAGCCAAGTATAGATACCCAACCCTTTACAACACCTAACCTTATCCAAACTAGAGAAACCACTAAGGTGTCCAATTTCAACTTCCATCCATTCCCTGGAGGTGAATTGGACAACAACAAAAAGCAAGAAAGTTCCCAGTATATGCCTTTAAGTCCTGGCAATAAATCAGCTTCCTCAACAGCATTAGGACTTCTCCTAAAACCCTCAGTATTCAAAGAAGTGGTGCAGAGAAATTTGAATTTTGTAAATGAAGAAATTGTATTGAAAAACACACAAAAAGGCACTGATGGAGTTGAGGGGATTTTTAATAACGGAAGTACGAGTACCTTTTACATATGCTCTTCCATTAGCAACAACCTACCTAACTTGGAGTCCCCAGAAGAGAGCACATTGCCACTATATCACAGTTCCCTGCAATTCCCCATGGCCCATGGAACAGTACTTTAA 624 0.399 MSRDSLVLSGAYNNEEAAARAYDLAAIEHRGINAVTSFDLRTYIRSLRPSAHSTTSQEQKPSIDTQPFTTPNLIQTRETTKVSNFNFHPFPGGELDNNKKQESSQYMPLSPGNKSASSTALGLLLKPSVFKEVVQRNLNFVNEEIVLKNTQKGTDGVEGIFNNGSTSTFYICSSISNNLPNLESPEESTLPLYHSSLQFPMAHGTVL. 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01586 207 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10 104 - -
Seca9g01586 207 MobiDBLite consensus disorder prediction 97 112 - -
Seca9g01586 207 SUPERFAMILY DNA-binding domain 7 40 IPR016177 GO:0003677
Seca9g01586 207 Gene3D AP2/ERF domain 2 41 IPR036955 GO:0003700|GO:0006355
Seca9g01586 207 MobiDBLite consensus disorder prediction 49 69 - -
Seca9g01586 207 MobiDBLite consensus disorder prediction 90 112 - -
Seca9g01586 207 ProSiteProfiles AP2/ERF domain profile. 1 39 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01586 Seca-Chr9 26659976 26660728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01586 10 73 AP2-EREBP Transcription Factor Family AT5G57390 36.000 4.10e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01586 - - lja:Lj2g3v1338880.1 234.572