Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01583 ATGGCAGATCATGATAACTTCCCGGATTTTAACGGTGATGAAGAGATTGGTAGCAAGAAGGATCAAAAGGTGGAATCAGCTAAGGGGGAAATAGGAGAAGTTAGAGAAGAAAATGAAAGGTTGAAGTTCTTATTGGGGCAGCTTGTAAATGATTATCAATCACTGCAAATGAAGCTTCAACCGACAAAAGAGGACACAAAAACCACTCATCATCATGAAGAAAATGAAGAAAGTGAACTTGTCTGCCTCTCTCTTGGGATATCATCTAGCTCCCAAGGCCAACATAGGATGGATATGGAGGAGAAAAAGAATAATAGCAATACAACAACTGAAAACAGAGAAGATGATGAAGATAAAGGACTTGCACTTGGATTAAATATGATCAGATTTGACCCTGCAGCAGTATCTGATCATCAGATTGAAGCTGCAAATAATCTCAGTCCAGCTGAAAGTAGCCTTGATGATGGCAAAGGGAAGGAAGCAGCTGAGGAACCAACTGAGATGTGGCCACCCAGTAAAGTTTTGAAGACAATCAAAATTGGGGATAAAAGTGAAGTTTCTCAACTCAAGAAGGCTGCTAGGGTTTCTATTAGAGCCAGATGTGACTCTCAAACGATGAATGATGGGTGCCAATGGAGAAAATATGGACAGAAAATAGCAAAAGGAAATCCATGCCCGCGTGCTTACTATCGATGCACTGTCTCTCCATCTTGTCCTGTAAGAAAACAGGTGCAAAGATGTGCTGAGGATATGTCCATATTGATTACCACCTATGAAGGAATCCACAATCACCCACTTCCTCTTTCAGCCACTGCTATGGCCTCAACAACTTGTGCAGCTGCTTCTATGCTTCAATCTCCTTCATTGATGAGTTCACAACAAGGAATAACCAATTCAGATAATATTATTAATTCCAGTACTGCTGCTCACACCCCTAATGCTCTAAACTTCTCAACATACCAAATTTCAAGACCACATCCATTCCACCTTCCCAACTCTTGTATTTCAACCTTAAATTCTCACCCCACAATCACTCTGGACCTAACTGCATCACCAACTCCCACTCATTCTGGAAATTTCACCTCAGGCTTCTCATACACACCAAAGTATTCATCAACAAACCTTAATTTTTCCTCCTCCTCCTCATCAGGTTTTTCTCCTCTACAATATTCCAACATGCCACAATCACCTTGGAGCAGTTATAGTGGTAGTTACTTCAACTCTGAAACTGGAACACTAGCCCAAATTAGAAATCAAGGTGGTTACACTAACATGTTAAACACTGGAAAACAACCACCTCAGGGGGTTATCCACAATTCCAATTATATGAGTAACCATAGCATTTCTCAACAGTCTCTGCCAGATTCCATAGTTGCTGCAACCAAGGCAATTACAACCAACCCAAAATTTCAATCAGCATTAGTGACTGCTCTGACAACATATGTTGGCAATGGAGGTGGTAGCACTAGCAATAGCTTAATAGAAAATCATCATGTTCTTGAGAGTGCAGCAGCATTGAAATTAAAGGAAAACATTTCTAACCAAAATAACAGAGGAACATGTTCACCATCATCAAGGTACTTGATGAATATGTCTTCCTCTGCTCTTAACTCTCAACAAGGAAACTCGATTAATGCATTCCCACCACCACCAGCAGTGTCTAAAAGTGCCTCTGGCTCGTCTTCTAATAGAAGTAGCCAGCATTCGGAGAAGTGA 1716 0.4085 MADHDNFPDFNGDEEIGSKKDQKVESAKGEIGEVREENERLKFLLGQLVNDYQSLQMKLQPTKEDTKTTHHHEENEESELVCLSLGISSSSQGQHRMDMEEKKNNSNTTTENREDDEDKGLALGLNMIRFDPAAVSDHQIEAANNLSPAESSLDDGKGKEAAEEPTEMWPPSKVLKTIKIGDKSEVSQLKKAARVSIRARCDSQTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVSPSCPVRKQVQRCAEDMSILITTYEGIHNHPLPLSATAMASTTCAAASMLQSPSLMSSQQGITNSDNIINSSTAAHTPNALNFSTYQISRPHPFHLPNSCISTLNSHPTITLDLTASPTPTHSGNFTSGFSYTPKYSSTNLNFSSSSSSGFSPLQYSNMPQSPWSSYSGSYFNSETGTLAQIRNQGGYTNMLNTGKQPPQGVIHNSNYMSNHSISQQSLPDSIVAATKAITTNPKFQSALVTALTTYVGNGGGSTSNSLIENHHVLESAAALKLKENISNQNNRGTCSPSSRYLMNMSSSALNSQQGNSINAFPPPPAVSKSASGSSSNRSSQHSEK. 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01583 571 Pfam WRKY DNA -binding domain 207 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca9g01583 571 MobiDBLite consensus disorder prediction 534 571 - -
Seca9g01583 571 SUPERFAMILY WRKY DNA-binding domain 200 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca9g01583 571 MobiDBLite consensus disorder prediction 145 168 - -
Seca9g01583 571 FunFam probable WRKY transcription factor 31 190 268 - -
Seca9g01583 571 SMART WRKY_cls 206 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca9g01583 571 MobiDBLite consensus disorder prediction 57 117 - -
Seca9g01583 571 MobiDBLite consensus disorder prediction 95 117 - -
Seca9g01583 571 Coils Coil 99 119 - -
Seca9g01583 571 ProSiteProfiles WRKY domain profile. 201 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca9g01583 571 MobiDBLite consensus disorder prediction 63 79 - -
Seca9g01583 571 MobiDBLite consensus disorder prediction 1 33 - -
Seca9g01583 571 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 19 491 IPR044810 GO:0003700
Seca9g01583 571 Gene3D WRKY domain 191 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01583 Seca-Chr9 26622721 26627527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01583 23 483 WRKY Transcription Factor Family AT1G18860 36.863 4.54e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca9g01583 WRKY 7.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01583 - - lang:109339108 527.324