Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01579 ATGAAGAATTTCTTGGTTTCTTTATATTTCTTGTTTCCTGCTATCATTGCAGTCATTCTTGTGTTGTTTACTCCAATTCCCAGTGCACAGCTAACAACAAGTGAGAATAGAATTCTTCTCCAAGTTCAGAGGCTTCTTGAATATCCTCAAGTTCTTCAAGAATGGACCAACTTCACCAACTTCTGCTACCTCCCTCCCTCACCTTCCCTCAAGATTGTCTGCTTAAATGGTCATGTAACTGAATTAACTATCATTGGAAACATGAACTCCCCATCTTTTCATAGAACCAAGCCAGTTCCTTGGAATTCAGCTGAGACTCTTTCAGAAAGATTCTCCATTGATTCTTTCTTTACTGTCTTGACAAAGCTTTCAAATATGAAGGTGTTGTCATTGGTGTCCCTTGGTTTGTGGGGTCCTTTACCATCCAAGATTAGCCGGTTCTGGTCACTTGAAGTGCTTAACATTACCTCAAATTTCATTTATGGAGAAATCCCACCATCGATCTCCTCTTTGAAAAATCTCAGGAGTCTAGTTTTGGTTGATAATCAGTTCAATGGGAGTGTCCCTAATCTAAGAAGGCTAGCCTCTCTTGAAGAGCTCAATTTGGGTGGTAACAGATTTGGTCCTGAATTCCCTTCAGTGGACAAGAATCTTGTGAAGATTATCTTAAGAAACAATTCTCTAAGATGTCAAATTCCTTCCCAACTCATGCATGTTGATAAACTTCAGCTATTTGACATCTCTTCCAATGCAATATTTGGAAACATCCCATCATTTCTGTTCTCTCTTCCTTTCCTCCAGCACCTAAACTTGGCTGCAAATCAACTAAGTGGTTCCCTTCCTGTGAATATATCTTGTAGTCCTGCTCTAACATTTGTTGATATCTCACACAACCTCCTGATAGGAAAATTGCCATCTTGCATTGGTTCAAAGTCCTCAAATCGAACAATATTGTATTCTGGGAATTGTTTGTCAATCAGAAGCTCACATGATCAACATCCATCTTCATATTGCAAGAAAGTGGAGGCCTTAGCGGTTAACCCACAACTTAAAAGACAGAAGAAGGAAATGAAGATGCTACTACGCCTAGTACTTGGTATCACTGGAGGTGTTGTGGGAATTGCAGGGCTTCTGGTTCTACTCATTTTGTGCATCTTGAGGAAGTCCAAAGCAGAAAGAGCTGATAGTAACATAGACAGATGTGTTGATTATATTGATGATAAAGTTTCTGTCCGTGCATATCCAAAACCAAATAATAATGCAAGACATGTTCCTCCGTTAATGAGGTTTGCTACACTTGGATTACCACCATACAGCATTTTCACATTAGAAGAAATTGAAGATGCAACTAACAACTTTGACCAATCAAGTCTAATAGGAGAAGGATCACAAGGACAGCTATATAAAGGTTGCCTCAGAGATGGTTCAATGGTCATGGTTAATCTTGTAAAATTAAAGGACAAGAGTTTGGCCAAAAACAGTATTCAGAACTTGAAAGTATTACCTTATTTACGGCACAGGCATTTAGTGAGTGTTCTAGGACACTCTGTCATCACTTATCAGGACCGTCCCCAAACAACAAGCACAATATTCATTGTATTTGAACACATCACAAACGTGTCATTGAGGGATCATCTTACAGATAGGAGAAAAAAGGAAATGCTGAAGTGGACACAAAGAATGGCAATCAGCACAGGCATTGCAAGAGGAATCCAGTTCTTACACACAGGAGTTAATACTGGCATATTTGGCAACAATATAAAGATTGAGAACATTCTGTTGGATAATAGTCTCAATGCAAAAATTACTGGATACAGCATTCCATTGCCATCCAAGAAAGTTCTTGACAGAAAACTTAATGAACAAAGTGCCCCCAATCATATTGGCAGCATCAATAATGCAGAAAAGGAAGACATCTATCAGTTGGGTGTTATTCTACTTGAACTTATCACTGGCAAACTAATTACATCTTCCAATGATGTAGAGGAGCTGAAGTATGAGCTGGAGAGAGGTTTATCAGAAGCTGCATCACCAATGTTAATGGCTGCATCACCAATATTAATAGGCACAATCGATCCTTCCCTCCAGGGAACTTACACATACGAATCACTGAAGATTGCAGTTCAGATCACCATCAATTGTCTCAGCAAGGTTTCTAGTAATCGCCCTTCAGTAGAGGATGTTCTCTGGAATTTGCAGTACTCCATGCAAGTTCAAGAGGCTAGGACCAGCAGTGGAAACCTCAATTTAAAATTCTAA 2259 0.3927 MKNFLVSLYFLFPAIIAVILVLFTPIPSAQLTTSENRILLQVQRLLEYPQVLQEWTNFTNFCYLPPSPSLKIVCLNGHVTELTIIGNMNSPSFHRTKPVPWNSAETLSERFSIDSFFTVLTKLSNMKVLSLVSLGLWGPLPSKISRFWSLEVLNITSNFIYGEIPPSISSLKNLRSLVLVDNQFNGSVPNLRRLASLEELNLGGNRFGPEFPSVDKNLVKIILRNNSLRCQIPSQLMHVDKLQLFDISSNAIFGNIPSFLFSLPFLQHLNLAANQLSGSLPVNISCSPALTFVDISHNLLIGKLPSCIGSKSSNRTILYSGNCLSIRSSHDQHPSSYCKKVEALAVNPQLKRQKKEMKMLLRLVLGITGGVVGIAGLLVLLILCILRKSKAERADSNIDRCVDYIDDKVSVRAYPKPNNNARHVPPLMRFATLGLPPYSIFTLEEIEDATNNFDQSSLIGEGSQGQLYKGCLRDGSMVMVNLVKLKDKSLAKNSIQNLKVLPYLRHRHLVSVLGHSVITYQDRPQTTSTIFIVFEHITNVSLRDHLTDRRKKEMLKWTQRMAISTGIARGIQFLHTGVNTGIFGNNIKIENILLDNSLNAKITGYSIPLPSKKVLDRKLNEQSAPNHIGSINNAEKEDIYQLGVILLELITGKLITSSNDVEELKYELERGLSEAASPMLMAASPILIGTIDPSLQGTYTYESLKIAVQITINCLSKVSSNRPSVEDVLWNLQYSMQVQEARTSSGNLNLKF. 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01579 752 SUPERFAMILY Protein kinase-like (PK-like) 434 732 IPR011009 -
Seca9g01579 752 Gene3D Phosphorylase Kinase; domain 1 431 522 - -
Seca9g01579 752 Gene3D Ribonuclease Inhibitor 216 354 IPR032675 -
Seca9g01579 752 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 218 343 - -
Seca9g01579 752 ProSiteProfiles Protein kinase domain profile. 453 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01579 752 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 366 745 - -
Seca9g01579 752 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 32 216 - -
Seca9g01579 752 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 537 747 - -
Seca9g01579 752 Gene3D Transferase(Phosphotransferase) domain 1 537 749 - -
Seca9g01579 752 Pfam Protein kinase domain 454 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01579 752 Gene3D Ribonuclease Inhibitor 32 215 IPR032675 -
Seca9g01579 752 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 426 526 - -
Seca9g01579 752 SUPERFAMILY L domain-like 114 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01579 Seca-Chr9 26607376 26611104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01579 29 668 Miscellaneous Gene Families AT2G02780 48.799 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Seca9g01579 Pkinase 4.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01579 - - gmx:100800018 1031.17