Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01578 ATGGGGAAAGGAAGAAGTCCTGGGAAATGGTTTAAGAACTTAATCTTGGGGAAGAAATCATCATCGAAGTCCAATTCATCAAAGAAGAATGATATTTTTAAACCTTCAAGTAACAAGGATGTGCTGGGGTTTTCTGAGGTATCCGTGCCTGATCCAACTGTGGATTCTTTGCTGATATCCCCACCAATATCTGGAGCTAATGCTACTAAAGAAGCCCTTCCAGAAAAAGAAGTAGTTAGTAGGCCATCACAGGACAGGGATATTCTTCCAAATGGAGATAAAGAGGCTCATGCTCAAGCTATTGCTAATTTTGGATCTCAAGAGGATCCTGAGAAACTCAGGCTTACAGAAGCAGCTATAAAAGTTCAGGCTGCTTCTAGAGGCTATCTGGCTCGTCGGGAATTTCAAACACTCAAAGGTGTCATACAACTGCAAGCTATTATTCGTGGCCACTTGGTTAGAAGACAAGCTGTTTCTGCTTTATACTGTGTGAAAGGAATTGTTAAATTTCAAGCATTGGCTCGTGGTTACAATGTTAGGCGTTCTACTATTGGGCGTGAAGTCCTGAAAATTCGCAAGGATACTCAATGTTCAAATTCTATTGGGGTTGTTACATCCACACAGGCAGAGAAGCTGTCAGAAAATGGCTTTGTTCACAAGCTTTTGGCTTCCTCATCCTATTCACTTCCTTTATCCCTCAATGGTGAACTTGGGGAACCTAACTTGGCTTGGAAGTGGCTTGACCGCTGGACAAGGTCACACTTTTGGTCACCTCTTCCTAAATTGAAGAAGAAACATGATTCAGTGTCTGATGAAAAAGATAGGAGTTGTCAAACAGTTGAAAAGGGACAAGTTAAAAGAAATACCCGGAAATCTCCTGTTGTGAAAGCTGATGATGGCTCAATTCCAGGTTCTAACAAATATAAAAATCGTCCAAAAAAGGATTCAAACCACTCATTGCTTTCAGCTCAGGAACACCCACAAAAGGAAATAGAGAAAAGTAGTCTTAAAAAAACTCGCGTGCAGAATGTTCCAGACAGATCTGAGGTTATTAATGAGAAAAGAAAACCCAGCACTAGGAAAATTTCAGATCATATTGTTACAGATGTTTCCGAGCAGGGCCCAAAGGCCTCTTCAGAGAAAATGAAAGATTCAACAGTGCCAAAGTCAAAAGAGGCTGATCCTGAGAAAGGTCTTGAACAGCAAGCAAAAGAAGAGAATGATAATAAGCCACATAATGATCCTATTGCTGTCTTGCAGACTAGTGTGGAGAATGATGGAGATGAAAAAATTCAAAGACTTTGTGAAGACTTGAATGATGGTGACAAAATTATCAGCAACAACTGCCAAAGAAGAGCTTCACTGCCTGCTAATTTTAATGATCAAGATAATGAGTTACATAACACTCCAAGACTGCCCAGTTATATGGCTCCTACTGAATCTGCAAAAGCTAAGCTAAGGGCACAAGGCTCGCCAAGATTAGCTACTGATTTGGTAGACAAAAACAGTATAACCAGGCGGCATTCACTTTCATCTTCGCTTAATGGCAAGTCAGGTTCATTTTCCCCAAGAGCAGAAAGATTGATAGCCATGAGTGGCAGAGGAGTGCTAAAGACTGATAGATCTCTGTCATCTTCAAGGGATGGGACTGAGAAGTTGATCCAACCTCAGTGGAGAAGGTGA 1683 0.4112 MGKGRSPGKWFKNLILGKKSSSKSNSSKKNDIFKPSSNKDVLGFSEVSVPDPTVDSLLISPPISGANATKEALPEKEVVSRPSQDRDILPNGDKEAHAQAIANFGSQEDPEKLRLTEAAIKVQAASRGYLARREFQTLKGVIQLQAIIRGHLVRRQAVSALYCVKGIVKFQALARGYNVRRSTIGREVLKIRKDTQCSNSIGVVTSTQAEKLSENGFVHKLLASSSYSLPLSLNGELGEPNLAWKWLDRWTRSHFWSPLPKLKKKHDSVSDEKDRSCQTVEKGQVKRNTRKSPVVKADDGSIPGSNKYKNRPKKDSNHSLLSAQEHPQKEIEKSSLKKTRVQNVPDRSEVINEKRKPSTRKISDHIVTDVSEQGPKASSEKMKDSTVPKSKEADPEKGLEQQAKEENDNKPHNDPIAVLQTSVENDGDEKIQRLCEDLNDGDKIISNNCQRRASLPANFNDQDNELHNTPRLPSYMAPTESAKAKLRAQGSPRLATDLVDKNSITRRHSLSSSLNGKSGSFSPRAERLIAMSGRGVLKTDRSLSSSRDGTEKLIQPQWRR. 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01578 560 MobiDBLite consensus disorder prediction 69 90 - -
Seca9g01578 560 MobiDBLite consensus disorder prediction 308 367 - -
Seca9g01578 560 MobiDBLite consensus disorder prediction 261 294 - -
Seca9g01578 560 MobiDBLite consensus disorder prediction 261 427 - -
Seca9g01578 560 Gene3D - 113 163 - -
Seca9g01578 560 MobiDBLite consensus disorder prediction 376 412 - -
Seca9g01578 560 MobiDBLite consensus disorder prediction 74 90 - -
Seca9g01578 560 Pfam IQ calmodulin-binding motif 139 156 IPR000048 GO:0005515
Seca9g01578 560 Pfam IQ calmodulin-binding motif 116 136 IPR000048 GO:0005515
Seca9g01578 560 Pfam IQ calmodulin-binding motif 165 181 IPR000048 GO:0005515
Seca9g01578 560 Pfam Protein of unknown function (DUF4005) 462 537 IPR025064 -
Seca9g01578 560 MobiDBLite consensus disorder prediction 1 39 - -
Seca9g01578 560 MobiDBLite consensus disorder prediction 507 560 - -
Seca9g01578 560 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Seca9g01578 560 MobiDBLite consensus disorder prediction 538 552 - -
Seca9g01578 560 SMART iq_5 137 158 IPR000048 GO:0005515
Seca9g01578 560 SMART iq_5 114 136 IPR000048 GO:0005515
Seca9g01578 560 SMART iq_5 162 184 IPR000048 GO:0005515
Seca9g01578 560 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Seca9g01578 560 ProSiteProfiles IQ motif profile. 165 190 IPR000048 GO:0005515
Seca9g01578 560 MobiDBLite consensus disorder prediction 17 32 - -
Seca9g01578 560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 182 IPR027417 -
Seca9g01578 560 PANTHER IQ-DOMAIN 5-RELATED 1 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01578 Seca-Chr9 26587117 26594376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01578 4 560 IQD Protein Family AT1G14380 32.226 7.99e-74 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01578 - - aprc:113869184 803.127